Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1018 ATGGATGGGAGAGAGGCTATGGCATTCTCTGGAGGTCCCCCTTCATATTACATTCATAGAGGAGGCATTGCTGGGTCTGTCTCTGGAACACATTCTGGAGGGTTTCAAGTGCCTCCTGGGTTCAGACCAAACACCAGCATTCCAGTACAGTCAAATGTACGAGGTAGCTCTATGGTTTCTACAGTTACAGTAGAACCTACCAATTATAGTCATAATCATGGCATTAGCATTAGTTCGTCTCCTGGGGTACCTCCTTCAAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCCCGTAAATACCGTCCTGATGGACCAGTTTCTCTGGGTCTGTCTCCCGTTTCTGCCACTGCAAATTCTACCCCTGCATCAAGCACTCCAGCCCAGAAACGAGCTAGAGGGCGCCCACCTGGAAGTGGAAGGAAACAACAATTAGCTGCGCTAGGTGAATGGATGAACAGTTCAGCAGGGATGGCTTTTTCACCTCATGTTGTCATGATTGGAGCTGGGGAGGACATCGTAGCAAAGTTACTGTCCATTTCACAGCAGAGGCCAAGGGCACTGTGCATCTTGTCAGGAACTGGGACAGTTTCATCAGTTACTCTGAGGCAGCCTGCTTCTACCGTTGCCAGCATCACTCTTGAGGGCCGATTCCAAATATTACGCTTGGCTGGTTCTTACCTGGTTGCCGAAGATGGTGGACACCGCAATAGAACAGGTGGTGTGAGTGTCTCCCTTTCTAGTCCTGAAGGTCATGTTATTGGTGGTGGGGCTGCTGTGCTTGTTGCTGCAAGCCAAGTGCAGGTGGTGGTGTGCAGTTTTATATATGAAGGGTCCAAGACCAAGACTAAGCAAGTGAGTACCTCTCAGGGCGATGTTTCTGAAGCTGAGCATGATAACAAGTTAGCTACTCCAGCAAGTGCTCCGCCATCTCAAAACTATAATCAACCAACAAGAGGCATTTGGCCATCTGATCTAAAAAGTACACACACTGGTATTGATTTGATGCGTGGATAA 1014 0.4872 MDGREAMAFSGGPPSYYIHRGGIAGSVSGTHSGGFQVPPGFRPNTSIPVQSNVRGSSMVSTVTVEPTNYSHNHGISISSSPGVPPSSERVKKKRGRPRKYRPDGPVSLGLSPVSATANSTPASSTPAQKRARGRPPGSGRKQQLAALGEWMNSSAGMAFSPHVVMIGAGEDIVAKLLSISQQRPRALCILSGTGTVSSVTLRQPASTVASITLEGRFQILRLAGSYLVAEDGGHRNRTGGVSVSLSSPEGHVIGGGAAVLVAASQVQVVVCSFIYEGSKTKTKQVSTSQGDVSEAEHDNKLATPASAPPSQNYNQPTRGIWPSDLKSTHTGIDLMRG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1018 337 Gene3D - 161 295 - -
Prci10g1018 337 MobiDBLite consensus disorder prediction 111 127 - -
Prci10g1018 337 MobiDBLite consensus disorder prediction 284 337 - -
Prci10g1018 337 ProSiteProfiles PPC domain profile profile. 154 295 IPR005175 -
Prci10g1018 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 66 309 IPR039605 GO:0003680
Prci10g1018 337 MobiDBLite consensus disorder prediction 29 54 - -
Prci10g1018 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 158 275 - -
Prci10g1018 337 MobiDBLite consensus disorder prediction 67 85 - -
Prci10g1018 337 MobiDBLite consensus disorder prediction 304 324 - -
Prci10g1018 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 161 273 IPR005175 -
Prci10g1018 337 MobiDBLite consensus disorder prediction 67 143 - -
Prci10g1018 337 CDD DUF296 161 256 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1018 Prci-Chr10 6880057 6883545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1018 1 337 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.705 2.14e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1018 - - qsa:O6P43_034235 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g1018 10 6880057 6883545 Prci10g1018 10 6880057 6883545 ECH