Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g1005 ATGAAGTTATGCGCTTCACTGTTGTTTCTCAGTCTAGTTTCCATGGTCTCTTTCGTGACTTGTGATCCTGTGCCTTCAATTGAAGTTTGGGCGCTCACAACCTTCAAAGAGGCCGTATATGAAGACCCATACCTAGTTCTGTCCAACTGGAATACGCTGGATTCAGATCCTTGTGAATGGTTTGGCGTTTCCTGCTCTGAAGATCGAGATCATATCATTAAGCTCAATATTTCGGGGTCATCGCTAAGAGGATTTCTAGCGCCAGAATTGGGACAAATTACCTACTTGCAAGAACTGATTTTGCATGGCAACAATCTGATTGGAACAATACCTAAAGAATTGTTCGCGTTGAATTCCCTCAAGGTCTTGGATTTGGGGAAGAATCAATTATCTGGACCAATTCCTCCCGAGATTGGAAATCTAGCACAAGTTGTTAAAATAAACCTGCAGTCCAACGGGTTGACTGGTAGTCTACCTCCAGCGCTTGGAAATTTGAGATACCTTCAAGAACTTAGGCTGGACAGGAATAAACTTCAAGGGCCAGTTCCTGCTGGTGGCAGTTCAAACTTTTCTTCAAATATGCGTGGAATGTATGCCTCAAATGCAAATTTAACTGGTCTCTGTCAATCATCTCGGTTAAAAGTTGCAGATTTTTCATATAACTTCTTTGTAGGTGGTATACCTGCTTGCCTGGAGTATCTACCTAGGTCGAGCTTTCAAGGGAATTGCTTCCAAGGCAAAGAATTAAAGCAGCGTTCTGCTTTGAAATGTGCTGGTGCTTCACCTGCCAAGAGCCATCCTGTGGCCAATCCAAAGTATCGACCTGCCGAATATGTGTCCAAGCATCGAGCATCCCAACCTGCCTGGCTTTTGGTTCTGGAAATAGCGACAGGAACCTTGGTTGGTTCTCTCTTTCTGGTTGCAGTTCTCGCTGCTCTTCTTAAATGTAACAACAAATCATCTATCATTTGGCCTTGGAAGAAATATGCAAGCCGGAAGGACCATATGACAGTATACATAGACTCTGAGATGCTGAAGGATGTGACGAGTTACAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTAGTCTACAAGGGCACCTTGAAAGGTGGGCCTGAGATTGCTGTAATTTCTCTCTGTGTTAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGATTGAATCATGAGAACACTGGAAAACTTCTGGGATACTGTAGAGTGAGCTCTCCATTCACAAGGATGCTGGTTTTTGAGTATGCTTCAAATGGAACACTTCATGAGCACTTACATTATGGAGAAGGGAGCCAGTTATCATGGACTCGGCGTATGAGAATCATTATTGGCATTGCTCGTGGACTGAAGTATCTACACACAGAAGTTGACCCGCCATTCACTATATCAGAGCTGAATTCAAGTGCTGTATACCTTACAGAAGATTTTTCCCCTACGCTGGTTGATTTTGAGAGTTGGAAGACAATACTTGAAAGGTCAGAAAAGAATTCTGAATCTGTTGGAAGCCAAGGTGCTGTTTGTGTTCTTCCACATTCCCTCGAGGCTCGCCATCATGATCCCCAGGGAAATGTATATGCTTTTGGCATACTTCTGCTGGAGATAATAAGCGGGAGACCTCCATACTGCAAAAATAAAGGGTCCTTGGTGGATTGGGCCAAGGAGTATCTAGAAATGCCAGAGGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTCAGATACGAGGACCTTACAGTAATATGCGAGGTAGTAAATCTTTGTATCAATCCAGACCCCACCAAGCGTCCATCCATGACAGAACTATGCTGTATGCTGGAGAGCAGGATTGACACATCAATGAGTGTGGAGTTCAAGTCTTCATCTCTGGCTTGGGCTGAACTTGCACTTTCCTCCTAA 1980 0.4399 MKLCASLLFLSLVSMVSFVTCDPVPSIEVWALTTFKEAVYEDPYLVLSNWNTLDSDPCEWFGVSCSEDRDHIIKLNISGSSLRGFLAPELGQITYLQELILHGNNLIGTIPKELFALNSLKVLDLGKNQLSGPIPPEIGNLAQVVKINLQSNGLTGSLPPALGNLRYLQELRLDRNKLQGPVPAGGSSNFSSNMRGMYASNANLTGLCQSSRLKVADFSYNFFVGGIPACLEYLPRSSFQGNCFQGKELKQRSALKCAGASPAKSHPVANPKYRPAEYVSKHRASQPAWLLVLEIATGTLVGSLFLVAVLAALLKCNNKSSIIWPWKKYASRKDHMTVYIDSEMLKDVTSYSRQELEVACEDFSNIIGSSPDSVVYKGTLKGGPEIAVISLCVKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRVSSPFTRMLVFEYASNGTLHEHLHYGEGSQLSWTRRMRIIIGIARGLKYLHTEVDPPFTISELNSSAVYLTEDFSPTLVDFESWKTILERSEKNSESVGSQGAVCVLPHSLEARHHDPQGNVYAFGILLLEIISGRPPYCKNKGSLVDWAKEYLEMPEVMSYVVDPELKHFRYEDLTVICEVVNLCINPDPTKRPSMTELCCMLESRIDTSMSVEFKSSSLAWAELALSS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g1005 659 ProSiteProfiles Protein kinase domain profile. 361 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g1005 659 Gene3D Transferase(Phosphotransferase) domain 1 443 650 - -
Prci10g1005 659 SUPERFAMILY Protein kinase-like (PK-like) 337 634 IPR011009 -
Prci10g1005 659 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Prci10g1005 659 Gene3D Ribonuclease Inhibitor 141 261 IPR032675 -
Prci10g1005 659 PANTHER PROTEIN MALE DISCOVERER 2 9 657 - -
Prci10g1005 659 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Prci10g1005 659 Gene3D Phosphorylase Kinase; domain 1 335 442 - -
Prci10g1005 659 FunFam Leucine-rich repeat receptor-like protein kinase 26 184 - -
Prci10g1005 659 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Prci10g1005 659 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Prci10g1005 659 FunFam Inactive receptor-like serine/threonine-protein kinase 335 442 - -
Prci10g1005 659 SUPERFAMILY L domain-like 28 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g1005 Prci-Chr10 6835126 6840179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g1005 3 634 Receptor kinase-like Gene Family AT2G01210 27.486 3.21e-59 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Prci10g1005 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g1005 - - gmx:100794714 1039.25