Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0990 ATGCCTCAGGGAACCCTTGAAGTTCTTCTGGTTAGTGCCAAGGGTCTTGAGAATACCGATTTTCTTAACAACATGGATCCTTTTGTGATCCTCACCTGTCGTACTCAGGAGCAGAAAAGCAGCGTGGCGTCAGGTAAAGGATCTGAACCGGAATGGAACGAGACTTTTGTTTTTAACTTGACCGGTGACGTTTCGGAACTCACATTGAAGATATTGGACAGCGATGTCGGCTCAAACGATGATTTCGTGGGAGAAGCAACCATTCCTCTAGATGCTTTGTTCACTGAAGGAAGCGTCCCAGCAACAGCATACAATGTTGTCAAAAATGAGGAGTATCGCGGGGAGATTAGAGTTGGCCTCACTTTTACACCAGAAGAGAGCAGAAGCGAATATGCGGATGAGGAAAGCTTAGGCGGGTGGAGGGAATCTAGTTACAGAGACTAG 444 0.4685 MPQGTLEVLLVSAKGLENTDFLNNMDPFVILTCRTQEQKSSVASGKGSEPEWNETFVFNLTGDVSELTLKILDSDVGSNDDFVGEATIPLDALFTEGSVPATAYNVVKNEEYRGEIRVGLTFTPEESRSEYADEESLGGWRESSYRD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0990 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 126 IPR035892 -
Prci10g0990 147 SMART C2_3c 5 102 IPR000008 -
Prci10g0990 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Prci10g0990 147 Gene3D C2 domain 2 125 IPR035892 -
Prci10g0990 147 PANTHER C2 DOMAIN-CONTAINING 1 129 - -
Prci10g0990 147 MobiDBLite consensus disorder prediction 127 147 - -
Prci10g0990 147 MobiDBLite consensus disorder prediction 124 147 - -
Prci10g0990 147 Pfam C2 domain 4 97 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0990 Prci-Chr10 6768179 6770407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0990 4 119 C2H2 Transcription Factor Family AT4G21160 28.448 1.11e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0990 - - twl:120016880 235.343