Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0967 ATGGCGTCATCGTCGTCTTCCAAGAGCAAGAGGCACCCGCTGTACCATGGGATTCGGTGCCGTGGTGGAAAATGGGTGTCTGAAATCCGGGAGCCACGTAAGGATTCTCGCATATGGCTCGGAACGTTCCCGACTGCGGAGATGGCCGCCGCCGCCTATGATGTGGCGGCGTTAGCCCTCAAAGGGAGTGACGCCGTCCTCAACTTCCCTGACTGGCTCAGTACTTATCCAGCACCGGCGTCTTCATCTGCCGCCGACATTCGCAGCGCCGCCACAGCTGCAGCCGCACTCATGGCGCCGTCTCAAGAACGGACTAAACCCACTGACGCTGTTGATGTCGCAGGTAATGTTGATCATCGGAATGACAGCAATGTTGGGTGGTCTGAAACAGAATTTGTGGACGAGGAAGCAATATTCGACATGCCGAATTTGCTCGTGGACATGGCAGGGGGAATGCTACTGTCCCCTCCCAGAATTAACCCGCCACCCTCCGATAACTCTCCCGACGACAAGCCGTACGGAGAAAATTTGTGGAACTATTTTTGA 546 0.5568 MASSSSSKSKRHPLYHGIRCRGGKWVSEIREPRKDSRIWLGTFPTAEMAAAAYDVAALALKGSDAVLNFPDWLSTYPAPASSSAADIRSAATAAAALMAPSQERTKPTDAVDVAGNVDHRNDSNVGWSETEFVDEEAIFDMPNLLVDMAGGMLLSPPRINPPPSDNSPDDKPYGENLWNYF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0967 181 FunFam Ethylene-responsive transcription factor 2 13 71 - -
Prci10g0967 181 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Prci10g0967 181 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Prci10g0967 181 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 180 IPR045277 GO:0003700
Prci10g0967 181 MobiDBLite consensus disorder prediction 155 175 - -
Prci10g0967 181 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Prci10g0967 181 Pfam AP2 domain 15 62 IPR001471 GO:0003700|GO:0006355
Prci10g0967 181 Gene3D AP2/ERF domain 14 71 IPR036955 GO:0003700|GO:0006355
Prci10g0967 181 ProSiteProfiles AP2/ERF domain profile. 14 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0967 Prci-Chr10 6645235 6646800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0967 4 180 AP2-EREBP Transcription Factor Family AT5G52020 53.073 5.67e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci10g0967 AP2 1.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0967 - - pop:7490917 181.03