Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0956 ATGACGTCGTCTCAGGAGCATGACATGGATCAAGACGACGATGGCGGAACTTCCGACCTCAGCACCAGCGCCGGGGATCCCGCGGCCATCAACACCGACAGGAACAATGGACCTTCGAAGGGGCCCGTCTCGGACGATCCCATGGCTTTCCAGGTCTTGCCGTTGAAGGAGGAGCCCCTTGATTCGGATACGCCGTCAGACCAAGAACAAAAGACGCAGCCTTCCTCGTCTGCTCCGATTGGAGTCGTTCCTGTCGCGATGCAGATGCAAATGCCCCTGACTATGCCCATGTCCATGCCGGTCTCCACGGCGAGACGCTCCTCAGCCAAGGACCGTCACACGAAGGTGGAAGGCCGCGGACGTAGGATCCGAATACCCGCCACTTGCGCGGCTCGGATCTTCCAGCTGACTCGGGAGTTAGGTCATAAATCTGATGGCGAGACCGTTCGGTGGCTCCTCGAACGCGCGGAGCAGGCTATCATCGAGGCCACCGGCTCCGGCACCGTCCCAGCCATCGCTGTCTCCGTTGGGGGAACTCTAAAGATTCCCACAACGTCTAGCGCCAACAGCAATCCGGACTCCGAACTCAGGAAGAAGCGGAAAAGGCCGTCGAATAGCGAGTTTGTGGACGTGAGTGAAGCCGTTTCACAATCGTCCGGTTTGGCCCCGGTTCAATCGGCTCTCCCGCACGGCCTAGTGCCTCTGTGGGCAGTGGGCAACACTAATATGATGATCCCGGCGAACGCCTTTTGGATGATCCCTCCTGCGGCGGCGGCGGCGACGCCAGCGGGTGGAAGTACGGGATCGTCAAACCAACCACCTCAGATATGGACTTTGTCGCCGACGGTGACGCCTGTATTGAATGTGTCAGCCAGACCCGTATCATCTCTGGTGGCAGCAATAACAAATACCTCGAGCGGCATGGAAGTCTCGCCAGTGGGATGCAATAATTCGTCCAACTCAGCGGCGGTGAGTACGAGCATGGTGGGGCCAACGGCGGCGAAGAAATCGACGATGGCACCGAGCGTTAGTTGTAGCGGGGCGACGGGCGGTAGTAGTAGCGGCGGCAGCAAGGCCCAGATGCTGAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGTTGCAGTTGATGGGGCGGTCAGCGAATAAACAAGCGTAA 1161 0.5848 MTSSQEHDMDQDDDGGTSDLSTSAGDPAAINTDRNNGPSKGPVSDDPMAFQVLPLKEEPLDSDTPSDQEQKTQPSSSAPIGVVPVAMQMQMPLTMPMSMPVSTARRSSAKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLERAEQAIIEATGSGTVPAIAVSVGGTLKIPTTSSANSNPDSELRKKRKRPSNSEFVDVSEAVSQSSGLAPVQSALPHGLVPLWAVGNTNMMIPANAFWMIPPAAAAATPAGGSTGSSNQPPQIWTLSPTVTPVLNVSARPVSSLVAAITNTSSGMEVSPVGCNNSSNSAAVSTSMVGPTAAKKSTMAPSVSCSGATGGSSSGGSKAQMLRDFSLEIYDKQELQLMGRSANKQA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0956 386 MobiDBLite consensus disorder prediction 16 39 - -
Prci10g0956 386 MobiDBLite consensus disorder prediction 193 207 - -
Prci10g0956 386 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 58 364 IPR005333 GO:0003700
Prci10g0956 386 Pfam TCP family transcription factor 108 188 IPR017887 -
Prci10g0956 386 ProSiteProfiles TCP domain profile. 109 163 IPR017887 -
Prci10g0956 386 MobiDBLite consensus disorder prediction 335 358 - -
Prci10g0956 386 MobiDBLite consensus disorder prediction 182 211 - -
Prci10g0956 386 MobiDBLite consensus disorder prediction 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0956 Prci-Chr10 6527519 6529564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0956 91 383 TCP Transcription Factor Family AT2G45680 47.401 3.24e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci10g0956 TCP 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0956 - - pcin:129284605 700.279