Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0922 ATGAGAAGGCATCGTCAATTTCATCTTCCGCGTGCTCTCTTGTGCTCTGTTCTTTGTCTTCTTTCGTCTATCGCGGTCTCGCCCGTGACAGAGAAGGAGATTTTGCTTCAATTTAAGGGCAACATTACGGACGATCCTCAAAACAGTTTGAGCTCGTGGATTTCAAGTGGAAACCCTTGTGAAGATTATAGAGGAGTTTTCTGTAACCAGGAAGGTTTTGTGGAAAGAATCGTACTGTGGAACACTAGTTTGGCTGGAGTCTTGGCGCCGGCTCTGTCGGGGTTGAAATTTTTGAGGATTTTGGCACTGTTCGGGAATCGTTTTTCAGGGAAGATTCCGGAAGAATACGGTGACATTCACTCATTGTGGAAGATCAATCTGAGCTCCAATGCATTATCTGGCTCAATCCCGGAGTTCATTGGTGACTTAGAAAACATTCGCTTTCTGGATTTATCCAAGAATGGCTTCACTGGGGAGATCCCTTCGGCTCTGTTTAGGCACTGTTACAAAACCAGGTTCATTTCTCTTTCTCACAACAGTCTTTCAGGTATAATTCCGGCATCATTGGCGAATTGCTCGAACATGGAGGGATTTGATTTTTCTTTCAACAATCTAAGAGGGGGTATTCCTTCTGGGCTTTGTGATATTCCAAGTTTATCCTATATGTCCTTGAGAAGCAATGCCTTATCAGGAACAGTAAAAGAGAAGATTGTGGGATGCCAAAGTTTGACACTTCTGGATCTCGGAGATAATACATTCACTGGTTCAGCCCCTTTTAGCATCGTTGAGACGAAGAATCTTACTTATTTCAACGTATCATATAACGGTTTTAGTGGACAAATTCCTGAGATCCCTGCCTGTAGCGAGAGATTACAAATTTTTGATGCTTCAGGGAATGATTTGGATGGGGAGATTCCCTCTAGCATTACAGGATGCAAGAGCCTCAAGCTATTTGCCTTGGAGTCTAATAGGTTGAAAGGAACTATCCCGTTTGGGATAAAAGATATGGGAAGGCTGCTAGTTATTAAATTAGGTAATAATTCAATAAGTGGATCGATTCCCATAGGTTTTGGCGATATTCAGCTGCTTGAAATCCTTGATTTGCACAATCTAAACCTTGTCGGTGAAATTCCCAAAGATATAAGCAATTGTAGATTCCTTCTAGAGCTGGATGTTTCGGGTAATAACTTAGAAGGAGAGATTCCTCAGAACCTTAACAACTTGACAAACCTGGAAGTCCTTGACCTACATCAAAATCACCTCAATGGCAGCATCCCCACAAGCCTGGGAAACTTGTCAAAGATCCAATACTTAAATTTGTCACATAATTCACTTTCTGGTTCTATCCCTTCTTCCCTCGGGAATTTCATCAACCTGACACATTTTAATCTCTCATCTAACAATCTCTCTGGTGTCATCCCACCTATTCCAATCCTACTGAGTTTTGGTTCTTCGGCATTTTCCAACAACACTTTTCTTTGCGGTGCTCCTTTGGATACCCCTTGCTCTGTAAGCGGCACTATACCACAACCTACTTCTTCTGGGAAGCCTAAACTAAGTGTCTCTGCAATTATCGCAATCGTTGCTGCAGCAGTGATTCTTGCCGGCGTTTGTTTGGTGAGCATCATGAATATCAAGGCTCGTAGTAGGAAAAAAGATGAGCAGATGGTGATTGTTGAGAGTACACCCCTTGGATCTACAGAATCAAATGTTATAATAGGAAAGCTAGTTCTCTTCAGCAAAAGTTTACCATCCAAGTATGAAGACTGGGAAGCAGGTACCAAAGCATTGCTTGATAAAGAGTCTTTGATCGGCCGTGGATCAATCGGGACAGTCTACAGAACTGATTTTGAAGGCGGGATCTCAATTGCAGTGAAAAAGCTGGAGACATTGGGAAGAATCAGAAACCAGGATGAATTTGAGCAAGAAATTGGGCGAATAAGTAACCTTCAACACCCAAATTTAGTTGCCTTACAAGGTTACTATTGGTCCTCGACAATGCAGTTGATTCTATCAGAGTTTGTCCCAAATGGGAATCTCTACGATAATCTACATGGCTTCGGTTATCCTGGAACCAGCACTAGCAGCGGCAACAGGGAACTGAATTGGTCTAGAAGGTACCAGATTGCAGTTGGAACTGCCAGAGCCCTTGTCTACCTTCACCATGACTGTCGACCTCCAATTCTTCATCTCAACTTGAAGTCCTCTAACATACTCTTAGATGACAAGTACGAGGCAAAGTTGTCTGATTATGGGTTGGGAAAGTTACTTCCCATTTTGGACAACTACGGCTTGACCAAATTCCACAATTCTGTCGGGTATGTTGCACCAGAGTTGGCTCAGAGTATGAGACAGAGTGAGAAATGTGACGTGTACAGTTTTGGGGTCATTCTTCTGGAGCTGGTCACAGGGAGGAAGCCTGTAGAAAGTCCTACAGCAAACGAGGTTGTGGTTTTGTGTGACTATGTGAGAGGGTTATTGGAGACTGGCTCAGCTTCACTGTGCTTTGATGCGAGGTTGCTGGGTTTTGCGGAGAACGAGTTAATTCAGGTGATGAGATTGGGGCTTATATGTACGTCGGAGGATCCTTCAAGGAGACCAAGTATGGCTGAGGTTGTGCAGGTTCTTGAATCTATCAGAAATGGATTGGAATCAAATTAA 2661 0.4314 MRRHRQFHLPRALLCSVLCLLSSIAVSPVTEKEILLQFKGNITDDPQNSLSSWISSGNPCEDYRGVFCNQEGFVERIVLWNTSLAGVLAPALSGLKFLRILALFGNRFSGKIPEEYGDIHSLWKINLSSNALSGSIPEFIGDLENIRFLDLSKNGFTGEIPSALFRHCYKTRFISLSHNSLSGIIPASLANCSNMEGFDFSFNNLRGGIPSGLCDIPSLSYMSLRSNALSGTVKEKIVGCQSLTLLDLGDNTFTGSAPFSIVETKNLTYFNVSYNGFSGQIPEIPACSERLQIFDASGNDLDGEIPSSITGCKSLKLFALESNRLKGTIPFGIKDMGRLLVIKLGNNSISGSIPIGFGDIQLLEILDLHNLNLVGEIPKDISNCRFLLELDVSGNNLEGEIPQNLNNLTNLEVLDLHQNHLNGSIPTSLGNLSKIQYLNLSHNSLSGSIPSSLGNFINLTHFNLSSNNLSGVIPPIPILLSFGSSAFSNNTFLCGAPLDTPCSVSGTIPQPTSSGKPKLSVSAIIAIVAAAVILAGVCLVSIMNIKARSRKKDEQMVIVESTPLGSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESLIGRGSIGTVYRTDFEGGISIAVKKLETLGRIRNQDEFEQEIGRISNLQHPNLVALQGYYWSSTMQLILSEFVPNGNLYDNLHGFGYPGTSTSSGNRELNWSRRYQIAVGTARALVYLHHDCRPPILHLNLKSSNILLDDKYEAKLSDYGLGKLLPILDNYGLTKFHNSVGYVAPELAQSMRQSEKCDVYSFGVILLELVTGRKPVESPTANEVVVLCDYVRGLLETGSASLCFDARLLGFAENELIQVMRLGLICTSEDPSRRPSMAEVVQVLESIRNGLESN 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0922 886 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Prci10g0922 886 SUPERFAMILY L domain-like 166 494 - -
Prci10g0922 886 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 167 505 - -
Prci10g0922 886 Gene3D Ribonuclease Inhibitor 29 168 IPR032675 -
Prci10g0922 886 ProSiteProfiles Protein kinase domain profile. 598 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0922 886 SUPERFAMILY Protein kinase-like (PK-like) 599 877 IPR011009 -
Prci10g0922 886 SMART LRR_typ_2 432 456 IPR003591 -
Prci10g0922 886 SMART LRR_typ_2 143 167 IPR003591 -
Prci10g0922 886 SMART LRR_typ_2 408 431 IPR003591 -
Prci10g0922 886 SUPERFAMILY L domain-like 68 206 - -
Prci10g0922 886 Gene3D Phosphorylase Kinase; domain 1 568 674 - -
Prci10g0922 886 Gene3D Transferase(Phosphotransferase) domain 1 675 885 - -
Prci10g0922 886 FunFam Putative LRR receptor-like serine/threonine-protein kinase 575 674 - -
Prci10g0922 886 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 675 885 - -
Prci10g0922 886 Gene3D Ribonuclease Inhibitor 239 507 IPR032675 -
Prci10g0922 886 Pfam Leucine rich repeat 389 445 IPR001611 GO:0005515
Prci10g0922 886 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 28 166 - -
Prci10g0922 886 CDD STKc_IRAK 604 879 - -
Prci10g0922 886 Pfam Protein kinase domain 600 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0922 886 Gene3D Ribonuclease Inhibitor 169 238 IPR032675 -
Prci10g0922 886 PANTHER OS05G0588300 PROTEIN 210 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0922 Prci-Chr10 6269557 6273139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0922 23 885 Receptor kinase-like Gene Family AT1G62950 64.994 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Prci10g0922 Pkinase 7.8e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0922 - - qsa:O6P43_034163 1375.92