Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0913 ATGGATCCAATGGCAGGACATGGGCACTCTCTTCCTCCACCATTCCATCTACACCAGCAATCGCAGCATGAGCATCAATTTCAGACTCTGCAGCAAAACACAGAAGATGAACAAAGCGGAAGCAGCAGTGGCCTAAACCTCTCCCACAAGAGAGAGCGAGAAGAAAGCAGCCACAACAACAACAACGATCAAGGGAACATGAACGGCGAGGGTGGAGAAATCACGAGAAGGCCCCGAGGTAGACCGGCGGGATCCAAGAACAAACCCAAACCACCCATCATCATAACCCGAGACAGTGCAAATGCCCTGAGAACCCACGTCATGGAGGTAGGGGACGGGTGCGATATCATGGAGAGCGTGTCTAACTTCGCCAGGCGACGCCAGAGAGGGGTTTGTATCATGAGCGGAACCGGCACCGTCACCAATGTCACTCTGAGGCAACCCGCTTCTTCGAGTGCCGTCGTTACACTTCACGGAAGGTTCGAGATCTTGTCGCTCGCAGGATCCTTCTTGCCGCCACCGGCTCCTCCGGCCGCTTCCGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGTGGGACGGTAGTCGGGACTCTTACGGCTTCCGGGTCGGTGGTGATTATGGCGGCGTCGTTTAGCAACGCCGCCTACGAGAGGCTTCCGCTGGAGGAAGAAGACCCTACGGCAGCGCTTCAAGGGCAAGGAATTGGGTCACCAACAGGTGGAGTTAGTCAGCAACAGCTATTAGGGGACGCGGCAGGTCCACTCATGCATGCTTTGCCTCCTCATCTTCTTAATTCTATGCAGATGCCATCTGATCAGCCTTTCTGGGCTACCGCTCGTCCTCCATTCGGATGA 867 0.5548 MDPMAGHGHSLPPPFHLHQQSQHEHQFQTLQQNTEDEQSGSSSGLNLSHKREREESSHNNNNDQGNMNGEGGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVGDGCDIMESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSSAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLTASGSVVIMAASFSNAAYERLPLEEEDPTAALQGQGIGSPTGGVSQQQLLGDAAGPLMHALPPHLLNSMQMPSDQPFWATARPPFG 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0913 288 ProSiteProfiles PPC domain profile profile. 100 237 IPR005175 -
Prci10g0913 288 MobiDBLite consensus disorder prediction 1 95 - -
Prci10g0913 288 FunFam AT-hook motif nuclear-localized protein 103 230 - -
Prci10g0913 288 Gene3D - 103 234 - -
Prci10g0913 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 245 IPR014476 GO:0003680
Prci10g0913 288 MobiDBLite consensus disorder prediction 15 46 - -
Prci10g0913 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
Prci10g0913 288 CDD DUF296 104 171 IPR005175 -
Prci10g0913 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0913 Prci-Chr10 6237678 6239537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0913 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.545 1.62e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0913 - - pop:7478098 381.333