Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0909 ATGGAAGCAAGGGATGGAATTAGCAGTGCAGTCACGGTGGTAGGATCAGACGATCCGTCGGAGTACCATGTGGCTCCCCGGACCGAGAACCCAGCAACCACTGGTGGATCGACAACGCCAGCGCCGGCTCCGACACCGGCAGCTCAAGGCACTGCTCCTCCTCCGCAGTCTGCAGCGGCTGGAGGGGCGCCAACAGCCATGATGATGCCGGGGAAGAAGAAAAGAGGTCGACCGAGAAAGTACGGGCCAGACGGGTCGGTGACCATGGCGCTATCTCCCAAACCAATATCTTCTTCGGCCCCTCCATCCCAAGTCATCGATTTCTCCGCAGATAAGCGCGGGAAAGTTCGTCCAGCTAGTTCTGTCAGCAAAGCCAAATTCGAGGTCGAGAATTTAGGTCAATGGGTTGCATGCTCTGTAGGTGCTAATTTTACACCCCATATAATTACTGTTAATTCTGGGGAGGATGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGCGTCATATCGAGCGTCACACTTCGTCAACCTGATTCTTCTGGGGGCACATTGACTTATGAGGGACGTTTTGAAATTCTGTCATTGTCTGGGTCATTCATGCCAAGTGAAAGTGGGGGAACACGGAGCCGATCTGGCGGCATGAGTGTTTCTTTGGCGAGTCCAGATGGTCGTGTTGTAGGTGGCGGAGTGGCAGGTCTATTAGTAGCAGCAAGTCCTGTACAGGTAGTGGTAGGAAGTTTTTTGGCTGGAAACCAGCATGAGCAAAAGCCAAAGAAACAGAAAATTGAGGTGATATCCACAGCCATACCGACTGCTGTCATTCCCTTGTCTAGCGTTACCGATCCAGTCCCTCTCCTCACTTCCTCGTCTTGCTTCCGTGGCGACAATTGGTCTGCAATCCCGGCAGATAACAGGAATAACACCACCGCCAACACCAATGCCAACAATAATGGTAATGGTAACAATAATAGTAAGCCAACAGATATTAATGTGTCACTATCTGGAGGGTAA 1047 0.5043 MEARDGISSAVTVVGSDDPSEYHVAPRTENPATTGGSTTPAPAPTPAAQGTAPPPQSAAAGGAPTAMMMPGKKKRGRPRKYGPDGSVTMALSPKPISSSAPPSQVIDFSADKRGKVRPASSVSKAKFEVENLGQWVACSVGANFTPHIITVNSGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVIPLSSVTDPVPLLTSSSCFRGDNWSAIPADNRNNTTANTNANNNGNGNNNSKPTDINVSLSGG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0909 348 FunFam AT-hook motif nuclear-localized protein 1-like 146 276 - -
Prci10g0909 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 259 IPR005175 -
Prci10g0909 348 MobiDBLite consensus disorder prediction 30 45 - -
Prci10g0909 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 143 263 - -
Prci10g0909 348 CDD DUF296 145 236 IPR005175 -
Prci10g0909 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 329 IPR039605 GO:0003680
Prci10g0909 348 MobiDBLite consensus disorder prediction 312 348 - -
Prci10g0909 348 ProSiteProfiles PPC domain profile profile. 141 280 IPR005175 -
Prci10g0909 348 MobiDBLite consensus disorder prediction 1 83 - -
Prci10g0909 348 Gene3D - 146 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0909 Prci-Chr10 6195827 6200649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0909 11 327 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.652 6.90e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0909 - - qsa:O6P43_024280 417.542