Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0877 ATGGACTTGAAGTCGTCTCCTGTATCTCCTGTCCTAACTGACCCTGTTCCTGTTAACAAGTCAAGACTGGGAATCCATTCTAGTGCATTGATTTACTCCCAGCAGGATCCACCAGTACCCCCTACTACTCCCGGCAAGTATGCGAGAACCAGTTCGAGAAAAAGTGTTGCCAATCTTGATGATGTCCGCTCCAATGGATGGCTAGACGCCATGAAGGCCTCCTCGCCCCCGAGAAAGAAGCTAGTTAAGGGTTCTAATAACACTCAGGTCACTTATTTTGACTCCGACGATGAGGACTATCACTCCTGGATGCGCCATTATCCATCCGCACTGGACTCCTTTGACAACCTTGTTGACCGTGCAAAGGATAAGAAAATTGCAATGTTTCTAGATTATGATGGAACACTTTCCCCAATAGTGGACGATCCAGATTCTGCCTTTATGTCTGAAGCTATGCGGGCAACGGTGAGAAGTGTGGCAAAGTACTTTCCCACGGCAATCATTAGTGGAAGAAGTCGTGATAAGGTTTTTGATTTAGTAAAATTAACGGAACTCTACTATGCTGGGAGTCATGGGATGGATATCATTGGCCCCGTCTGTGAAACCCTGTCCATTAACAATCCAGATTGTCTGAAATCTACGGACCCTCAGGGAAAGGAAATAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTGGAACCCTCGTCGAGATAACTAGAGATATCAAAGGCGCAAAGGTTGAAAACCACAAGTTTTGCGTCTCTGTACATTATCGTAATGTAGATGAGAATAATTGGATAACTGTTGGACAACTTGTCCATGACATGTTAAAAAACTACCCACGTTTACGTTCAACCCACGGACGCAAGGTTTTAGAGATTCGTCCGGTGATTGATTGGAACAAAGGGAAAGCAGTTGAGTTCATACTTGAGTCTCTAGGGTTAAGTGACAAGGATGACGTGATAGCCATCTACATTGGAGATGATAGGACGGACGAAGATGCATTCAAGGTGTTGCGGGAGAGCAAGAGTGGATGCGGCATTCTGGTATCGTCGGTGAGGAAAGAGAGCGATGCCTTTTACTCTCTGAGGGACCCATCGGAGGTGATGAAATTTCTGCAGCTGCTGGTGAACTGGAAGAGACAACAATACGAAGACCAGAAGCAATCCCTATCCCTTGGCATTTGGTTTTGA 1212 0.4563 MDLKSSPVSPVLTDPVPVNKSRLGIHSSALIYSQQDPPVPPTTPGKYARTSSRKSVANLDDVRSNGWLDAMKASSPPRKKLVKGSNNTQVTYFDSDDEDYHSWMRHYPSALDSFDNLVDRAKDKKIAMFLDYDGTLSPIVDDPDSAFMSEAMRATVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVCETLSINNPDCLKSTDPQGKEITLFQPAKEFLPMIDEVFGTLVEITRDIKGAKVENHKFCVSVHYRNVDENNWITVGQLVHDMLKNYPRLRSTHGRKVLEIRPVIDWNKGKAVEFILESLGLSDKDDVIAIYIGDDRTDEDAFKVLRESKSGCGILVSSVRKESDAFYSLRDPSEVMKFLQLLVNWKRQQYEDQKQSLSLGIWF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0877 403 NCBIfam HAD-IIB family hydrolase 128 346 IPR006379 -
Prci10g0877 403 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 46 393 IPR044651 GO:0004805|GO:0005992
Prci10g0877 403 Gene3D - 237 398 IPR023214 -
Prci10g0877 403 Gene3D - 126 209 IPR023214 -
Prci10g0877 403 FunFam Trehalose 6-phosphate phosphatase 227 303 - -
Prci10g0877 403 Pfam Trehalose-phosphatase 129 373 IPR003337 GO:0003824|GO:0005992
Prci10g0877 403 MobiDBLite consensus disorder prediction 29 52 - -
Prci10g0877 403 SUPERFAMILY HAD-like 127 387 IPR036412 -
Prci10g0877 403 NCBIfam trehalose-phosphatase 124 383 IPR003337 GO:0003824|GO:0005992
Prci10g0877 403 CDD HAD_TPP 127 377 - -
Prci10g0877 403 FunFam Trehalose 6-phosphate phosphatase 233 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0877 Prci-Chr10 5921902 5927023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0877 122 382 Trehalose Biosynthesis Gene Families AT1G70290 27.076 2.49e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0877 K01087 - qsa:O6P43_024315 567.77