Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0875 ATGGACTTGAAGTCGTCTCCTGTATCTCCTGTCCTAACTGACCCTGTTCCTGTTAACAAGTCAAGACTGGGAATCCATTCTAGTGCATTGATTTACTCCCAGCAGGATCCACCAGTACCCCCTACTACTCCCGGCAAGTATGCGAGAACCAGTTCGAGAAAAAGTGTTGCCAATCTTGATGATGTCCGCTCCAATGGATGGCTAGACGCCATGAAGGCCTCCTCGCCCCCGAGAAAGAAGCTAGTTAAGGGTTCTAATAACACTCAGGTCACTTATTTTGACTCCGACGATGAGGACTATCACTCCTGGATGCGCCATTATCCATCCGCACTGGACTCCTTTGACAACCTTGTTGACCGTGCAAAGGATAAGAAAATTGCAATGTTTCTAGATTATGATGGAACACTTTCCCCAATAGTGGACGATCCAGATTCTGCCTTTATGTCTGAAGCTATGCGGGCAACGGTGAGAAGTGTGGCAAAGTACTTTCCCACGGCAATCATTAGTGGAAGAAGTCGTGATAAGGTTTTTGATTTAGTAAAATTAACGGAACTCTACTATGCTGGGAGTCATGGGATGGATATCATTGGCCCCGTCTGTGAAACCCTGTCCATTAACAATCCAGATTGTCTGAAATCTACGGACCCTCAGGGAAAGGAAATAACTCTGTTTCAACCCGCAAAAGAATTCCTGCCTATGATCGACGAGGTTTTTGGAACCCTCGTCGAGATAACTAGAGATATCAAAGGCGCAAAGGTTGAAAACCACAAGTTTTGCGTCTCTGTACATTATCGTAATGTAGATGAGAATGTGAGGATTCGACAGCTCTTATGTAATTGGATAACTGTTGGACAACTTGTCCATGACATGTTAAAAAACTACCCACGTTTACGTTCAACCCACGGACGCAAGGTTTTAGAGATTCGTCCGGTGATTGATTGGAACAAAGGGAAAGCAGTTGAGTTCATACTTGAGTCTCTAGGGTTAAGTGACAAGGATGACGTGATAGCCATCTACATTGGAGATGATAGGACGGACGAAGATGCATTCAAGGTGTTGCGGGAGAGCAAGAGTGGATGCGGCATTCTGGTATCGTCGGTGAGGAAAGAGAGCGATGCCTTTTACTCTCTGAGGGACCCATCGGAGGTGATGAAATTTCTGCAGCTGCTGGTGAACTGGAAGAGACAACAATACGAAGACCAGAAGCAATCCCTATCCCTTGGCATTTGGTTTTGA 1236 0.4563 MDLKSSPVSPVLTDPVPVNKSRLGIHSSALIYSQQDPPVPPTTPGKYARTSSRKSVANLDDVRSNGWLDAMKASSPPRKKLVKGSNNTQVTYFDSDDEDYHSWMRHYPSALDSFDNLVDRAKDKKIAMFLDYDGTLSPIVDDPDSAFMSEAMRATVRSVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVCETLSINNPDCLKSTDPQGKEITLFQPAKEFLPMIDEVFGTLVEITRDIKGAKVENHKFCVSVHYRNVDENVRIRQLLCNWITVGQLVHDMLKNYPRLRSTHGRKVLEIRPVIDWNKGKAVEFILESLGLSDKDDVIAIYIGDDRTDEDAFKVLRESKSGCGILVSSVRKESDAFYSLRDPSEVMKFLQLLVNWKRQQYEDQKQSLSLGIWF 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0875 411 NCBIfam HAD-IIB family hydrolase 128 354 IPR006379 -
Prci10g0875 411 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 46 401 IPR044651 GO:0004805|GO:0005992
Prci10g0875 411 CDD HAD_TPP 127 385 - -
Prci10g0875 411 SUPERFAMILY HAD-like 127 395 IPR036412 -
Prci10g0875 411 Pfam Trehalose-phosphatase 129 381 IPR003337 GO:0003824|GO:0005992
Prci10g0875 411 MobiDBLite consensus disorder prediction 29 52 - -
Prci10g0875 411 FunFam Trehalose 6-phosphate phosphatase 233 400 - -
Prci10g0875 411 Gene3D - 237 406 IPR023214 -
Prci10g0875 411 Gene3D - 126 209 IPR023214 -
Prci10g0875 411 NCBIfam trehalose-phosphatase 124 391 IPR003337 GO:0003824|GO:0005992
Prci10g0875 411 FunFam Trehalose 6-phosphate phosphatase 227 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0875 Prci-Chr10 5921902 5927023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0875 122 390 Trehalose Biosynthesis Gene Families AT1G70290 26.690 1.87e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0875 K01087 - qsa:O6P43_024315 560.451