Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0827 ATGCCTATAGTAATGGCTTCTTTGTTCTTGTCGTTGATTTTCTTTTCTGTTTTGTTATTGTTTCATGCAGAAACAGTGAAATGTACATCCCACGACGATAACATCCCGAGATCATCAGCGTCTTCCACAAACTCATCATCATTCAAGCACCATCACAGGTGGGTGGGGCCAATCGGTCTCCGTGTAATCACCGTTGACGCCAACGGCACCGGGCCATTCAGATCAGTGCAAGCCGCCGTCGATGCTGTCCCGGACAACAATCGAATGAACGTCGTCATTAACATTAGCGCTGGATACTACATAGAGAAGGTGGTGGTGCCGGCGACGAAACCATACATAACGTTTCAGGGAGCTGGGAGGGACGTGACGGTGATAGAATGGCATGACAGGGCGAGCGACCCTGGTCCCAATGGACAGCAGCTACGTACTTACAGAACAGCTTCTGTCACAGTCTTCGCCAACTATTTCTCCGCCAGGAATATCAGCTTTAAGAACACGGCACCTGCGCCGATGCCGGGAATGCAGGGATGGCAAGCTGCGGCGTTTCGTATATCAGGGGACAAGGCGTATTTCTCAGGCTGTGGGTTCTACGGCGCACAAGACACTCTCTGTGACGACGCCGGCCGCCATTATTTCAAGGATTGCTACATCGAGGGTTCCATCGATTTCATCTTCGGGAATGGCCGCTCCATGTACAAGGATTGTGTGCTGCACTCAATAGCGACGAAATTCGGCTCCATAGCAGCCCAAAAGAGAAAACACGAAGACGAGAAGACAGGCTTCACTTTCGTACGGTGCAGGGTCACTGGTACTGGCCCACTCTATGTAGGCCGGGCCTTGGGCCAGTACTCGAGAATCGTCTACGCTTATACGTATTTCGCTGACATTGTTACAGGCGAAGGCTGGGACGATTGGAACCATGTGGACAACAAAAACAAGACTGTGTTCTTCGGAGTGTACAAGTGCCACGGCCCAGGAGCGGCGGCGGCTCGTGGGTTGTCTTGGGGTCGTGAGCTTGACTTTGAATCTGCTCATCCTTTCCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATCGCACCTTCTGATGCTTAA 1095 0.5169 MPIVMASLFLSLIFFSVLLLFHAETVKCTSHDDNIPRSSASSTNSSSFKHHHRWVGPIGLRVITVDANGTGPFRSVQAAVDAVPDNNRMNVVINISAGYYIEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVLHSIATKFGSIAAQKRKHEDEKTGFTFVRCRVTGTGPLYVGRALGQYSRIVYAYTYFADIVTGEGWDDWNHVDNKNKTVFFGVYKCHGPGAAAARGLSWGRELDFESAHPFLVKSFVNGRHWIAPSDA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0827 364 ProSitePatterns Pectinesterase signature 2. 217 226 IPR033131 -
Prci10g0827 364 Gene3D - 60 363 IPR012334 -
Prci10g0827 364 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 360 - -
Prci10g0827 364 SUPERFAMILY Pectin lyase-like 61 361 IPR011050 -
Prci10g0827 364 FunFam Pectinesterase 59 361 - -
Prci10g0827 364 Pfam Pectinesterase 63 355 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0827 Prci-Chr10 5624400 5626763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0827 5 364 Carbohydrate Esterase AT5G47500 71.625 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0827 - - cam:101501763 591.652