Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0794 ATGGAAGAAGAAGCTGTCCTTCTGCACATTCAAGCCATGCCATCCACTTCAACCGCCCCATCCTCCACAGAACCCAATGCACAGAAGAACACTGTAGAAGGTTCCGGAGACAACCAGAAAAGGGCGAAGCGAGAGCGACGATTCTCTTATGATTACGACGCAGGCCAACGCTACCGTGGAGTTCGCATTCGTCAATGGGGAAGATGGGTGTCTGAGATCAGAGAGCCCAAGAAGAAATCCAGAATCTGGCTCGGCACTTTCTCTACGCCGGAGATGGCGGCTCGAGCTCATGACGTTGCGGCTCTTACTATCAAAGGCTCCTCTGCTTTCCTCAATTTCCCTGAATTGGCCCCATAG 357 0.5238 MEEEAVLLHIQAMPSTSTAPSSTEPNAQKNTVEGSGDNQKRAKRERRFSYDYDAGQRYRGVRIRQWGRWVSEIREPKKKSRIWLGTFSTPEMAARAHDVAALTIKGSSAFLNFPELAP 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0794 118 SMART rav1_2 57 118 IPR001471 GO:0003700|GO:0006355
Prci10g0794 118 PIRSF PTI6 4 116 IPR017392 GO:0003700
Prci10g0794 118 MobiDBLite consensus disorder prediction 1 48 - -
Prci10g0794 118 FunFam Ethylene-responsive transcription factor 2 56 115 - -
Prci10g0794 118 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Prci10g0794 118 Gene3D AP2/ERF domain 56 115 IPR036955 GO:0003700|GO:0006355
Prci10g0794 118 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Prci10g0794 118 CDD AP2 56 116 IPR001471 GO:0003700|GO:0006355
Prci10g0794 118 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 29 117 - -
Prci10g0794 118 MobiDBLite consensus disorder prediction 11 35 - -
Prci10g0794 118 Pfam AP2 domain 57 106 IPR001471 GO:0003700|GO:0006355
Prci10g0794 118 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Prci10g0794 118 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0794 Prci-Chr10 5453196 5453962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0794 25 117 AP2-EREBP Transcription Factor Family AT5G11590 62.105 4.89e-36 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci10g0794 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0794 - K09286 pcin:129322018 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0794 10 5453196 5453962 Prci5g0488 5 6396795 6397644 CCT