Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0792 ATGACTCGGCGGTGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCCAATCGCGGTGTCAAGCTCTTTGGAGTTCGATTGACTGATGGCTCGATCCGGAAGAGTGCTAGTATGAGTAGTCTCAGCCACTATGCTGGGTCAAGCTCCGGAGCTCATCATGCTGGGTCCGTCAATCCGGGTTCGCCTGATGAGACGCCTGATCATGGTGCTGCCGCTGACGGTTACGCCTCCGAGGATTTTGTTCCTGGGTCATCGTCTGTTTCCCGGGAAAGGAAGAAGGGTGTTCCGTGGACTGAGGAGGAACATAGATTGTTCTTACTTGGATTGCAGAAGCTTGGCAAAGGTGATTGGCGTGGAATTGCCCGGAATTATGTTATATCAAGGACGCCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAATGTGTCTAGGAGGAAAAGACGCTCTAGTTTGTTTGACATTGTTGCTGATGAAACTGCTGACACACCAATGGCAGAACAAGACTTCTCGCCAGCTAGTCAGCCTGAGGCTGTAACAGAAGGCAATGACCCCTTGCCAGCTCCTCTGGCCATTGATGAAGAGTGCGAATCTATGGATTCCGCTTATTCAAATGATGGAGACTCTGCCTCTTTAAAGCCAGATAGCTCACAGTCACAGTCAGAGTCACAATCGCAGTTCCCAGTGCTATATCCTGCGTACTTTTCTCCTTTCTTCCCATTTCCTCTGCCTTATTGGTCAGGATACAGTCCGGAGCCCATCAAGAAGGAGGCAGTGCATGAGGTGCTAAAGCCTACTGCGGTACATTCTAAAAGCCCCATCAATGTTGATGAATTGGTTGGCATGTCTAAACTCAGTTTAGGGGACTCTATTGGTGAATCTGGCCCTTCCTCTCTTTCACTAAAACTCCTTGAGGGACCCTCTAGGCAGTCAGCTTTTCATGCAACTCCTTCATATGGTAATTCAGACATGAACGGCAATGCAATCCCTGCAGTTTAG 1020 0.4892 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAGSSSGAHHAGSVNPGSPDETPDHGAAADGYASEDFVPGSSSVSRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADETADTPMAEQDFSPASQPEAVTEGNDPLPAPLAIDEECESMDSAYSNDGDSASLKPDSSQSQSESQSQFPVLYPAYFSPFFPFPLPYWSGYSPEPIKKEAVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIGESGPSSLSLKLLEGPSRQSAFHATPSYGNSDMNGNAIPAV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0792 339 PANTHER TRANSCRIPTION FACTOR KUA1 3 277 - -
Prci10g0792 339 MobiDBLite consensus disorder prediction 45 98 - -
Prci10g0792 339 MobiDBLite consensus disorder prediction 209 230 - -
Prci10g0792 339 MobiDBLite consensus disorder prediction 1 21 - -
Prci10g0792 339 NCBIfam myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Prci10g0792 339 CDD SANT 99 144 IPR001005 -
Prci10g0792 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Prci10g0792 339 MobiDBLite consensus disorder prediction 170 230 - -
Prci10g0792 339 Gene3D - 98 150 - -
Prci10g0792 339 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Prci10g0792 339 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Prci10g0792 339 SMART sant 96 146 IPR001005 -
Prci10g0792 339 FunFam transcription factor MYB1R1 98 149 - -
Prci10g0792 339 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Prci10g0792 339 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0792 Prci-Chr10 5439666 5442595 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci10g0792 Myb_DNA-binding 3.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0792 - - pcin:129311785 521.161