Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0788 ATGCATCTTGAGGAATTGAAGGGAGAAGAGGTGGGAGGTGGAGAGGAAGAGAAATTATATCTCGGAAATGGTGTTATTGGTGGGGCAAATTTTTTCGTTTCAGATGCGAAAAGGGCTCTGGTTGGAGCGGGGGCTCGTGCTCTCTTCTATCCCACTCTGCTTTATAATGTCGTTAGGAATAAGATTCAGGCCGAGTTTCGGTGGTGGGATAAGGTTGATGAGTTCATATTATTAGGTGCTGTTCCTTTCCCTATTGATGTTCCCCGCTTAAAGGAGCTGGGTGTTCGAGGAGTCATCACATTGAATGAGTCATATGAGACTTTGGTCTCAACCTCACTTTATCACGCTCATGGAATTGACCATCTCATGATTCCTACTAGAGATTACTATTTCGCACCTTCATTGCATGACATATGCTCTGCTGTAGACTTCATTCATGAAAATGCGTTGGCTGGACGGGTTACATATGTCCATTGTAAAGCTGGGCGCGGTCGTAGCACAACTGTTGTTATCTGTTACTTGGTGCATTACAAGCTTATGACACCTAGTGCTGCATATGATTATGTGAAGTCAATTCGACCAAGGGTTCTTCTGGCTTCCTCTCAGTGGCAAGCTGTTCAGGAATACTACCACCTTAGGGTTAGGAAAGCGATGGCCTATGCTCCCTCGGGTAACATAGTAATGAAGGCACCTGCAGGTTCACTAGACCTTGTAACATTTGATGACGGTTCTGTGGTGGTGGTAACGGAGTCAGATCTAGAAGGATACGAGGCCACTTTGGGAAGCAAGATATGGGCAAATGTGAGCGTAGTGTACCAGGTGCGGGTCGCTGGACAGGCAGCGTTGGCAGGAATATCATGCCTTTGGCTGAGATATGGTAGGCACCAGGAGGTTTCCACAGTCAAAGCGAGCAGCAGCAATCATTTGGGTGGCATTAGTGTTGATATCCATGTTTACTGA 960 0.4646 MHLEELKGEEVGGGEEEKLYLGNGVIGGANFFVSDAKRALVGAGARALFYPTLLYNVVRNKIQAEFRWWDKVDEFILLGAVPFPIDVPRLKELGVRGVITLNESYETLVSTSLYHAHGIDHLMIPTRDYYFAPSLHDICSAVDFIHENALAGRVTYVHCKAGRGRSTTVVICYLVHYKLMTPSAAYDYVKSIRPRVLLASSQWQAVQEYYHLRVRKAMAYAPSGNIVMKAPAGSLDLVTFDDGSVVVVTESDLEGYEATLGSKIWANVSVVYQVRVAGQAALAGISCLWLRYGRHQEVSTVKASSSNHLGGISVDIHVY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0788 319 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Prci10g0788 319 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 60 212 IPR029021 -
Prci10g0788 319 CDD PTPMT1 68 210 IPR044596 GO:0004721
Prci10g0788 319 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Prci10g0788 319 Pfam Dual specificity phosphatase, catalytic domain 90 210 IPR000340 GO:0008138|GO:0016311
Prci10g0788 319 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Prci10g0788 319 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 19 290 - -
Prci10g0788 319 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Prci10g0788 319 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Prci10g0788 319 FunFam Dual specificity phosphatase domain protein 68 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0788 Prci-Chr10 5376699 5380262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0788 25 319 Protein tyrosine phosphatase (PTP) family AT2G35680 60.191 6.18e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0788 - - jre:108994353 456.447