Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0777 ATGGCCAATCAAGTTGAGTTTTCCGCCCTCGAACGCATAAAATTACATCTTCTAGGTGAACTGTCTCCGGTGGTAACCCCGGCTACCGATGCTCCTCAAGCCCCTTGGTTTGAGGAAGCGAACGCAACTTCAAGTTCTCAATCTCTCTGTTCCCAGTCTTCCATTTCTGACGCTAATTCCATCATGTCCGATTGCTTTCCTGATATCTTCGACTGCCCGACGCGTCCCGTACCTTCATCACAAAATCAAACGAATCCATTTGAATTCGACTGCAAACCCCAGATAATTGACCTCTCAACACCAAAATCCCAAGTACAAGCTTCGCAGTTCGAAACAAAGTTTCCCAAACTCGAACCCAGTTCCCCAGAAAGCTCTCCGTCAAACAGTTGCGTGCTGGACTTCGACCCTAGAACTCATGAATCGCAGCAGAAACTTCTTTCGAGTAGGAAACCGTCGTTGCAAATCTCGCTTCCGAAGAAAACCGAGTGGATCCAGTTTGGGAATCCGGAGCCCGCAGAGATGTTGGAGCAGAAAAAGTCAAAGGTGGATGAGAAAAAGCACTACAGAGGAGTCCGGCAGAGGCCGTGGGGCAAGTATGCGGCGGAGATCCGAGACCCGAACAAGCGGGGATCCAGGGTGTGGTTGGGAACATTCGACACAGCGATCGAAGCCGCTAAAGCCTACGATCGAGCTGCCTTCAAGCTTCGCGGCTCCAAAGCCATCCTAAACTTCCCTTTGGAAATAGAAACATCGAGCTCGGTAGTTAGCTCCGGCGAGGGAAAACGACTCCGTCAGGACGGAGAGGAGATGGCGGAAGTGGAAGTAAAGGCGTTGGGGAAGAAGGCCAAAACGACGACGGAATCGGAGTCCCAGGAGAATTATACAAAGGACACTCCGTTAACGCCGTCTAATTGGAAGGGTTTCTGGGACAGCGACTTGAACGGGATTTTCAGCGTCCCGCCATTATCTCCTCTGCCTCCCTTGGGTTGTACCCAGCTCATGGTTGTATGA 1011 0.5114 MANQVEFSALERIKLHLLGELSPVVTPATDAPQAPWFEEANATSSSQSLCSQSSISDANSIMSDCFPDIFDCPTRPVPSSQNQTNPFEFDCKPQIIDLSTPKSQVQASQFETKFPKLEPSSPESSPSNSCVLDFDPRTHESQQKLLSSRKPSLQISLPKKTEWIQFGNPEPAEMLEQKKSKVDEKKHYRGVRQRPWGKYAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEIETSSSVVSSGEGKRLRQDGEEMAEVEVKALGKKAKTTTESESQENYTKDTPLTPSNWKGFWDSDLNGIFSVPPLSPLPPLGCTQLMVV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0777 336 MobiDBLite consensus disorder prediction 277 301 - -
Prci10g0777 336 FunFam Ethylene-responsive transcription factor 2 186 247 - -
Prci10g0777 336 Gene3D AP2/ERF domain 186 247 IPR036955 GO:0003700|GO:0006355
Prci10g0777 336 PANTHER DNA-BINDING DOMAIN 139 293 IPR044808 GO:0003700|GO:0009873
Prci10g0777 336 SUPERFAMILY DNA-binding domain 187 247 IPR016177 GO:0003677
Prci10g0777 336 SMART rav1_2 187 251 IPR001471 GO:0003700|GO:0006355
Prci10g0777 336 Pfam AP2 domain 187 237 IPR001471 GO:0003700|GO:0006355
Prci10g0777 336 MobiDBLite consensus disorder prediction 115 134 - -
Prci10g0777 336 CDD AP2 186 245 IPR001471 GO:0003700|GO:0006355
Prci10g0777 336 PRINTS Ethylene responsive element binding protein signature 227 247 IPR001471 GO:0003700|GO:0006355
Prci10g0777 336 PRINTS Ethylene responsive element binding protein signature 188 199 IPR001471 GO:0003700|GO:0006355
Prci10g0777 336 ProSiteProfiles AP2/ERF domain profile. 187 245 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0777 Prci-Chr10 5351785 5353055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0777 1 336 AP2-EREBP Transcription Factor Family AT5G47230 45.029 1.08e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci10g0777 AP2 5.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0777 K09286 - qsa:O6P43_034054 317.005