Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0776 ATGCAAACCCACGACACCATGTCCGGACCCACCGGCTACTACTCCGATTTAGTCTATCTGGAATCCATTCGCCGTCACTTGCTCGGTGAATCCGACGCTGCTCCGGTTGCTAAATCCAGTAACACCCCTGCTCGCGAACATTGGGGTGAATTGCCTCTCAGAGAGGACGACCCCGAAGACATGCTGCTTTATAGTGTACTCCGGGGCGCATTCCAAGTCGGATGGCCCCCATCGGTCCACGCTGGCTCACCGGAAACCGTCTGCTCCACTTTTCCATACGCCATTGCTGTGAAACCGGAACCGGATGTAGTACAGGTGGCGGGGGCGGCCCCGCGAGAGAAGGTGAAGGAGAAGGCGAGGCATTACCGAGGGGTGCGTCAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGAGACCCGGCTAAGAATGGAGCTCGGGTGTGGCTGGGGACATTCGAGACGGCGGAAGATGCGGCTATGGCATACGACCGAGCCGCTTACAAAATGCGGGGCTCGCGGGCTCTTCTTAATTTTCCACTCCGGGTGAACTCTGGTGAACCGGAGCCTGTTAGAGTGAGGGCGAAGCGGTCTTCTTCGTCGGAGACCGGGAAGGGAAAGGCGAAGGTGGCGAGAAGGGAGGTTGGAAGTGACGTGGCATCTCGTGCAAGTAGTGGACAACATCTATCGGTCGGCTGA 696 0.5905 MQTHDTMSGPTGYYSDLVYLESIRRHLLGESDAAPVAKSSNTPAREHWGELPLREDDPEDMLLYSVLRGAFQVGWPPSVHAGSPETVCSTFPYAIAVKPEPDVVQVAGAAPREKVKEKARHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAMAYDRAAYKMRGSRALLNFPLRVNSGEPEPVRVRAKRSSSSETGKGKAKVARREVGSDVASRASSGQHLSVG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0776 231 PANTHER DNA-BINDING DOMAIN 101 207 IPR044808 GO:0003700|GO:0009873
Prci10g0776 231 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 SMART rav1_2 121 185 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 ProSiteProfiles AP2/ERF domain profile. 121 179 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 MobiDBLite consensus disorder prediction 188 215 - -
Prci10g0776 231 FunFam Ethylene-responsive transcription factor 2 120 180 - -
Prci10g0776 231 Pfam AP2 domain 121 171 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 CDD AP2 121 179 IPR001471 GO:0003700|GO:0006355
Prci10g0776 231 MobiDBLite consensus disorder prediction 186 231 - -
Prci10g0776 231 Gene3D AP2/ERF domain 120 182 IPR036955 GO:0003700|GO:0006355
Prci10g0776 231 SUPERFAMILY DNA-binding domain 121 181 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0776 Prci-Chr10 5334945 5335882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0776 7 196 AP2-EREBP Transcription Factor Family AT5G47220 55.330 7.54e-67 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci10g0776 AP2 6.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0776 K09286 - gmx:100803653 242.276