Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0775 ATGCCTATATCAAAAAACAATCAACTATCTGTTAAGTCAATCTATATGAACTCGACCATATGGAAGCTCTCTTCTTCTATATTTGACAATTCCATTACTTCACTCAACTATGACGACTTCACAGACTTCGACCCTGACTCGGACGCTTTTGAGGGCTTCATAGCTACAAACTTGACCATGGCGGTGGTAGCAAAAGCAACAACTTGGATGTTACATGAGGAGCACGTGCCATTTCTGGGGGTGAAACTGCCAAGCCAGATGCAAGAATGCTCCATTTTTCAGAGTTCTAAGCCAAAAAAGGTTGCTCAGGTTTCAAGTCTTGTGGAAACAAATATTCACTCTTTCACATATAAAGCACTCAAGAAGGCAACACATGACTTCAATGAAGAAGTGGGAAAGGGTTCCTTTGGCATTGTGTACAAAGGCACCCTTAGATCAATAACCAACAATGTTGTTGCAGTGAAAAGATTGGATAGATTAGTTCAAGAACGGGAGAAGGAATTCATGAATGAGTTGAGTGTTATTAGAAAATCATGCCATAAAAATTTGGTACAATTGATTGGGTTCTGTGATGAAGGAGTCCATAGACTATTAGTGTATGAGTTTATGAGCAATGATACTCTTGCAGATATTCTATTTGGAAATCTTAAACCCAATTGGGATTTAAGGGTTAACTTTGCTCTAGGAATTGTAAGAGGATTGCTTTACTTACATGAAGAGTGTGAGGCTCCCATAATTCACTATGATATAAAACCTCAAAATATATTGATCGATGGAAATTTCGTGCCAAAGATCTCAAATTTTGGGTTGGAAAAGTTGATGTATTCCAATAAGAGCCAAACCCATACGATGATGAAAGGAACAAAAGGATATGTAGCACCAGAATGGTTCAAGAATGTTCCAGTGACTGCTAAGGTGGATGTGTACAATTATGGAGTAATGCTGTTAGAGATAATTTGTAACAGAAGAAGCGTGAAGATGGATATTGAAAAAGGGAAGGAAGAAGAGGAAATACTAATAGGTTAG 1026 0.3791 MPISKNNQLSVKSIYMNSTIWKLSSSIFDNSITSLNYDDFTDFDPDSDAFEGFIATNLTMAVVAKATTWMLHEEHVPFLGVKLPSQMQECSIFQSSKPKKVAQVSSLVETNIHSFTYKALKKATHDFNEEVGKGSFGIVYKGTLRSITNNVVAVKRLDRLVQEREKEFMNELSVIRKSCHKNLVQLIGFCDEGVHRLLVYEFMSNDTLADILFGNLKPNWDLRVNFALGIVRGLLYLHEECEAPIIHYDIKPQNILIDGNFVPKISNFGLEKLMYSNKSQTHTMMKGTKGYVAPEWFKNVPVTAKVDVYNYGVMLLEIICNRRSVKMDIEKGKEEEEILIG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0775 341 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 85 332 - -
Prci10g0775 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Prci10g0775 341 Gene3D Transferase(Phosphotransferase) domain 1 203 339 - -
Prci10g0775 341 ProSiteProfiles Protein kinase domain profile. 125 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0775 341 ProSitePatterns Protein kinases ATP-binding region signature. 131 155 IPR017441 GO:0005524
Prci10g0775 341 Gene3D Phosphorylase Kinase; domain 1 87 202 - -
Prci10g0775 341 SUPERFAMILY Protein kinase-like (PK-like) 106 324 IPR011009 -
Prci10g0775 341 FunFam S-receptor-like serine/threonine-protein kinase 94 202 - -
Prci10g0775 341 SMART serkin_6 125 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0775 341 FunFam Os07g0541700 protein 203 288 - -
Prci10g0775 341 Pfam Protein kinase domain 128 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0775 Prci-Chr10 5313631 5317442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0775 113 334 Receptor kinase-like Gene Family AT1G56120 44.248 1.46e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci10g0775 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0775 - - pcin:129322013 657.521