Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0753 ATGGGGGTTATGGAGAATATGCTGCATTCAAAGTCATTAACCATGGTTACATCAACCAATAACAGCAATAACGATGAAAGATTTGGGAAACCATCAATGGAAAATGGGCATTGCATTGTTCTTACCCAGCTCAATTTTAAGCGTCGAAAAGTGTCTGCCATTCGGGATTTTCCTGAAGGTTGTGGACGGTTTGTGCCTAGAATTGATTTAACACCAAATGTAAATACTACTAACTTTGGTGTTGATGAAGGTATAGTAGATGAGGATAAGAGTGGTGAAGATTTAAAGGATGGATTAGCTAGAACTTCCAAGCTTGAGGATGAGTCCCAACATGCTATGTTTCCTACTCAGACTCTCCGACAATCCAATGTCTATAGTCGGAAGAAGGAAATGTCAATGGTCTCATCAAAAATTGTGGATGAGCCTCCTTTGACGAATGATGAAACTGTAAAAATGGGGTTGGTTGGTTTGGAAGACTTGGAATTAGGAACTGCAGAAGGGGTAAAATGTGATTCTTCTAAAACGTCAAAAGACTTGCATAAAAATGGCCCTTCTTCTTTGGTAGGTGAGGTGGTTCTATTAAATAGTAAATTCTTGTCACCAAATGTAAGCTTGGCTGATTCTATTGATTGTTTGGGTAAGAGTGTAACAAGAAGGCATTTTCCCCAAAGAAAAGTTTCAGCCACTAGAGACTTTCCTCCTTTATGTGGACGAAATGCTCCACGCCTTGGTAAGGATGGGTGTTTAGAGGAGATCTCTTCTCAAGATAAAAAAATCAAGGGTCAACTGGACTTGGTTGTAGATGACAAGGAAGTGAAAAAGGTTGTCGCCTCTAATGTGAAAGAAAAGGAAAAGAACGTTGAATGTGGAGATGCTTGCAATCTAGTGAATATAGTACAAGGTGATTTTGAAGGGAATTTTATGTGGAGAGTGAATAAGTTAGATGAACTTGGAGCATCTTCTGACATGAAATTGCTACCAGAAGATTCAGGAGATAAGCACGTTGCACTTCCTGATGATAGCAATCACAATCAAGTATTAACAAGTACCCCAACTGTAGTTGAAGAAGAAAGTAGAGATGCTATACAGCTTGAGGAAACACTAGGAAAGGAGATAGTAGTTTATTCAGGAGCCCAAAGCCTTGTGGCAGAGCCTCTTGATACATCTTCTTGCCATCATAAGCCAAAACGAGATTTCAATGAATTGCAAGCTCCATCTAGCAGGATGGTTGTCCTAGGCTTGATGTCTGAATCGACATGTCCTTGGAGGAATAATCTAGGTTCTTCCAAATCTGGTATGTTGGGTGGTAAAATTGGAGGAAAGCGAAAGAAAACTGATTTTTTTGCACGGTTTGATAGGTCTAAGGTTGCTGCCAAGTCTAAAGACTCACCAAATTGTCTTGGGAAGAAGCCTGTAATAAAGAAAAAAGGAAGTCGTGCTGCTGAAGGTATGGGTCAACTAGTAGTTTGGGAGAATAAAGATACTCTTGACTCAGATAAAAATATTGAAGAGACAAGTGTTGTCCCAAGATCCCAAGGTTTTGATGTTTATGTTCCTCCTTTTGGTCATGGAAATCTGAGTGGTAATGACAGAGACTCAAATGTGACTCGAAATAAAGTGAGGGAGACATTGCGCCTTTTCCAAGCAGTTACTAGAAAGCTATTACAGGAGGATGAAGCACATTCAAAAAACAAAGGGAACGCTCATAGGAGGATTGATACAATAGCATCTCAGATCCTTAAGGAGAAAGGGAAATATGTTAACACGGGGAAGCCAATCTTGGGACCTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAGCTTAATATGATCGGTCTTCATCGCCAGTCTCAGGGAGGCATAGATTCTGTAGTGCATAATGGTAAGATCCTTGCAACTAGTGTGGTTTCATCTAAAGGCTATGCTGATGAGTTGGGCAGTTCAGATGTCTTGACTTATACCGGGCAGGGGGGAAGTATGTCAAAGAATGGTAAAGAACCTGAAGATCAGAAGCTTAAGAGGGGCAATCTTGCTTTGAAGAACAGTGTCACAGAAAAGAATCCTGTCAGGGTAATACGTGGCTGTGTATCAACAGATGGAAAATGTAGGAGATATGTTTATGATGGGCTATATGAAGTTGAGGCATATTGGCAGGATATGGGGCCACATGGTAAGTTGGTTTATAGGTTTCGGATGCGAAGAATCCCAGGTCAACCAGAACTTGCTTGGAAAGAAGTGAAAGAATGCAAAAAATTCAAAAAAAGGGGGGGTCTATGTGTTGAGGACATTTCTAATGGGAAGGAGTCAATTCCAATATGTGTTGTGAACACGATAGATGATGAGAAACCCCCACCATTTGAATACACAACTAGAATGATATACCCTAATTGGTGCAATCCCATTCCTCCAGAGGGATGTAGTTGTACAAATGAATGCTCTGACTCTGACAAATGTTCTTGTGCGGTCAAAAATGGGGGAGAGATCCCATACAATCATAATGGGGCCATTGTAGAAGCAAAGCCTCTTGTTTATGAGTGTAGTGCTTCTTGCAAGTGTCCTTCAACATGTCATAACAGAGTCAGCCAACATGGCATAAAATTTCAACTCGAAATTTTTAAAACCAAGACAAGAGGGTGGGGTGTGAGATCGCTAAATTCCATCCCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGCTTCTTGAAGAGAAGGAAGCAGAACAAAGAACTGGTAATGATGAATATCTGTTTGATATCGGGAATCTCATCAACAATACTCTTTGGGATGGACTTTCAAGCCTAATACCTGAGGCACAGTCAAGTTCTTGTGAAATTGTGGAAAATAGTGGCTTCACCATTGATGCTGCCCAGTATGGCAATGTTGGGAGATTTATCAACCATAGTTGCTCCCCTAATCTTTATGCTCAAAATGTTCTTTATGATCATGATGACAAGAGAATACCTCATATTATGCTTTTTGCTGCTGAAAATATTCCTCCTCTGCAAGAGTTGTGTTATGATTATAATTACATGATAGATCAAGTTTATGATTCTGATGGCAATATAAAGAGGAAGGCTTGCTTTTGTGGTTCCGCAGAGTGTACTGGTAGGATGTATTGA 3132 0.4033 MGVMENMLHSKSLTMVTSTNNSNNDERFGKPSMENGHCIVLTQLNFKRRKVSAIRDFPEGCGRFVPRIDLTPNVNTTNFGVDEGIVDEDKSGEDLKDGLARTSKLEDESQHAMFPTQTLRQSNVYSRKKEMSMVSSKIVDEPPLTNDETVKMGLVGLEDLELGTAEGVKCDSSKTSKDLHKNGPSSLVGEVVLLNSKFLSPNVSLADSIDCLGKSVTRRHFPQRKVSATRDFPPLCGRNAPRLGKDGCLEEISSQDKKIKGQLDLVVDDKEVKKVVASNVKEKEKNVECGDACNLVNIVQGDFEGNFMWRVNKLDELGASSDMKLLPEDSGDKHVALPDDSNHNQVLTSTPTVVEEESRDAIQLEETLGKEIVVYSGAQSLVAEPLDTSSCHHKPKRDFNELQAPSSRMVVLGLMSESTCPWRNNLGSSKSGMLGGKIGGKRKKTDFFARFDRSKVAAKSKDSPNCLGKKPVIKKKGSRAAEGMGQLVVWENKDTLDSDKNIEETSVVPRSQGFDVYVPPFGHGNLSGNDRDSNVTRNKVRETLRLFQAVTRKLLQEDEAHSKNKGNAHRRIDTIASQILKEKGKYVNTGKPILGPVPGVEVGDEFQYWVELNMIGLHRQSQGGIDSVVHNGKILATSVVSSKGYADELGSSDVLTYTGQGGSMSKNGKEPEDQKLKRGNLALKNSVTEKNPVRVIRGCVSTDGKCRRYVYDGLYEVEAYWQDMGPHGKLVYRFRMRRIPGQPELAWKEVKECKKFKKRGGLCVEDISNGKESIPICVVNTIDDEKPPPFEYTTRMIYPNWCNPIPPEGCSCTNECSDSDKCSCAVKNGGEIPYNHNGAIVEAKPLVYECSASCKCPSTCHNRVSQHGIKFQLEIFKTKTRGWGVRSLNSIPSGSFICEYIGELLEEKEAEQRTGNDEYLFDIGNLINNTLWDGLSSLIPEAQSSSCEIVENSGFTIDAAQYGNVGRFINHSCSPNLYAQNVLYDHDDKRIPHIMLFAAENIPPLQELCYDYNYMIDQVYDSDGNIKRKACFCGSAECTGRMY 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0753 1043 SMART preset_2 764 855 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0753 1043 SMART G9a_1 590 742 IPR003105 -
Prci10g0753 1043 SUPERFAMILY PUA domain-like 578 751 IPR015947 -
Prci10g0753 1043 ProSiteProfiles Post-SET domain profile. 1027 1043 IPR003616 -
Prci10g0753 1043 Pfam Pre-SET motif 767 863 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0753 1043 ProSiteProfiles SET domain profile. 871 1013 IPR001214 GO:0005515
Prci10g0753 1043 ProSiteProfiles Pre-SET domain profile. 808 868 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0753 1043 ProSiteProfiles YDG domain profile. 595 738 IPR003105 -
Prci10g0753 1043 Pfam SAD/SRA domain 594 742 IPR003105 -
Prci10g0753 1043 Gene3D SET domain 760 1043 IPR046341 -
Prci10g0753 1043 SUPERFAMILY SET domain 754 1014 IPR046341 -
Prci10g0753 1043 CDD SET_AtSUVH-like 788 1014 - -
Prci10g0753 1043 Gene3D - 577 759 IPR036987 -
Prci10g0753 1043 Pfam SET domain 882 1013 IPR001214 GO:0005515
Prci10g0753 1043 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 494 1037 - -
Prci10g0753 1043 SMART set_7 871 1019 IPR001214 GO:0005515
Prci10g0753 1043 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 160 1043 IPR025794 GO:0016571
Prci10g0753 1043 MobiDBLite consensus disorder prediction 657 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0753 Prci-Chr10 5189070 5197633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0753 530 1040 Su(var)3-9 homologs AT5G04940 40.341 3.50e-115 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci10g0753 SAD_SRA 1.3e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0753 K11420 - qsa:O6P43_024410 1087.79