Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0730 ATGACTTCTAACGCCGAAGGAAGTGATTTAGCTGACGTATCTTGTGAGTCCGCAAAAACCATGAACTTGTTTCCGACCAAGGAGAATAACAGAGAACCGCAAAACTTCTCAACGATGGACTTATTTCCGCATCTCTCCACAGAAGAGATTCCAAAGACGGCAAATTTCAGTGCATCTAAGTCTGTCACTAAGGAGCCTGGAGTTGGACAGATGACAATCTTTTATGGCGGACAAGTTGTGGTGTTCGATAATTTTCCCACTGAAAGAGTCACGGAGATCTTGGCCTTTGCCAGCAGAGGAACATTCCCTACACAGAACAGCTTTGCTTATGCTTTTCCTCAGAGCCAGCCTTCGTTTCCTCATAATTCAATTGGATTTTCTTCTGATTCCTGCAGGCCGTTTCTCCTAATGAATATTAATCCTAATATTTGCAATGCTTTGGTTCAAGGGCACCCTCAGTCACCATCTGGACCTGTGGTTGGTGACCTCCCAATTGCTAGGAAAGCTTCACTTCATCGATTCTTAGAGAAGAGGAAGACAGGTGAGATCACTTAA 555 0.4414 MTSNAEGSDLADVSCESAKTMNLFPTKENNREPQNFSTMDLFPHLSTEEIPKTANFSASKSVTKEPGVGQMTIFYGGQVVVFDNFPTERVTEILAFASRGTFPTQNSFAYAFPQSQPSFPHNSIGFSSDSCRPFLLMNINPNICNALVQGHPQSPSGPVVGDLPIARKASLHRFLEKRKTGEIT 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0730 184 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Prci10g0730 184 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 180 IPR040390 -
Prci10g0730 184 Pfam tify domain 66 98 IPR010399 -
Prci10g0730 184 SMART tify_2 64 99 IPR010399 -
Prci10g0730 184 Pfam Jas motif 164 180 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0730 Prci-Chr10 5026514 5028618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0730 20 179 Tify Gene Family AT1G19180 34.302 6.09e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Prci10g0730 tify 8.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0730 K13464 - gmx:100801449 167.933