Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0726 ATGTATAGCGGCATGGCTGTATCAGGAAGAACTCGGTCTAGACAAGCAAGCACTGGAAAGCCATACTTTGAGAAGGATAATAAGCGTAGGAAACGGCAAGCGGTTGAGAAAATTCCATCTCAAGAAGAACGGTGCTCAAGCTATACTGTATCTAATGATGGCGATGAGGAGGAGGACGTGACATCTTCTAGCAGCATGTGTATTGCCAGGAGAACTCGGTCTCATTTTGCTCCTTCAAAATTTAGAAACGCCAAATCAGGGACAATCAGCAATCCCCTTAGCCTGGACGACGACGAAGAGGAGAATGAGACAAGAAATCGCAGCTTTTTGTGTCAGGAGTCTCTCCGTGGTGAGGGGTTGGTGTCTCTTGAGAACTTAACTTCCTCAAGTGATGACGAACGAAATCCGAAAGCTATGACGAAGCGACTCAAGGTGTCAAAGTCACGGGAGAAATTAGGACCTGAGGAAGAATTTGATGAACTATTTGCTGAGATGGAAAAGGATCTCCATGATAGTGAAGACGAGGAAGGAATTGCAGAATTTACCGTGACATCATCGAAGTGTTCTTTAGGGACTAAGGCGTCACAGCCACAAGAGAAATTAGAGTCTGAGGAAGATTTTGATGAACTATGGGCTGAGATGGACAAAGTTCTTCGTAGTTGTGAAGACGAGGACGGAATTCCAGAAGTAACCATGACGTGTCTATCATCGAAGTGTACTTTTGGGACTAAGGCGTCACAGCCACTTGAGAAATTTGAGCTCGAGGAAGAATTTGATGAACTATGCGCTGAAATGAACATCCGTGATAGTGAAGCTGAGCACGGAATTCCAGATTCTACCATGAAATGTCTATCATCAAAGAATCCTTTTGGGACTAAGGCGTCAGGGCCTCCTGTGAAATTAAAGGTCCAGGAAGAATTTCATGAACTCTGGGCTGAGATGGACGAGGGTCTGCATCCTTATGGAGAAGATATTTCTGTTCAGGTTGAAAACGAATATTATGAGGTCCCATGTCTGGAAGGGGAAGTTAGTGCAACTACTCGTTGTCAACGGGGGAATCATTATCTCAGGATGGATGATGAAATTGGGGAAGTGTGTAGATATTGCCTACATGTAGTTCGGGACATCAAGGATTGTGACCCTCCGTTTTGCACAAACCGATGGGGAAAATCAGGTGGGAGATACTCTAACCCTTTGGAGAAAGATGATGACGCTTCCTCTAGTGACCTTGAGCAAGAAAATCTTGGCTGTGACGACAAATATTCCGGGTTTGAAACTTATACTTCCACGGGAACTGTGTGGGATATAATTCCAAGAGTGAAGAAGAGGATCATGTATGATCATCAACAGGAAGCTTTTGAATTTCTTTGGACGAACCTAGCTGGTGGAATTGTTCTTCACAAGTTGGAAGAGCAGTTAGATTTTGCTGGTGGGAGTGGTTGCATCATATCACATGCTCCTGGCACAGGGAAAACTTTTCTTACCATTGCCTTTCTGCAAGCTTTCATGACGAAATATCCAAATTGCAGACCCATGATCATATCTCCAACCAACATTCTTCATACATGGGAGAAGGAGTTGCAGAAGTGGAAAGGAGGTGTTCCCGTTCCTTTTCACAATTTGAACAAGCCTGATCTCTCTGGAGAGGAGAGTGAATCTGCCATGAGCCGTCTTTGGAAGCACGGTGGTCGTCGTGCACACACTAAAAGTGCAATCCGATTGGCCAAGTTGTGTTCCTGGAGAGAGGCTACAAGCATCTTAGGAATTAGCTACACGTTGTTCGTTTGGCTTGCTAGAAAGGGCTCTGATAACATGAAGAAAGCCCTTTTTGAACTTCCAGGTTTATTAGTTCTTGATGAAGGTCACACCCCTCGCAATTCCAGGAGCCTTGTCTGGGAGGCGTTGTCAAAAGTCAAGACAAAGAGGCGCATCATACTCTCCGGTACCCCTTTCAGAATAATTTCAAGGAGCTTTATAACACACTCCGCTTGGCGATGCCAAAGTTTGCAGGATTGA 2016 0.4484 MYSGMAVSGRTRSRQASTGKPYFEKDNKRRKRQAVEKIPSQEERCSSYTVSNDGDEEEDVTSSSSMCIARRTRSHFAPSKFRNAKSGTISNPLSLDDDEEENETRNRSFLCQESLRGEGLVSLENLTSSSDDERNPKAMTKRLKVSKSREKLGPEEEFDELFAEMEKDLHDSEDEEGIAEFTVTSSKCSLGTKASQPQEKLESEEDFDELWAEMDKVLRSCEDEDGIPEVTMTCLSSKCTFGTKASQPLEKFELEEEFDELCAEMNIRDSEAEHGIPDSTMKCLSSKNPFGTKASGPPVKLKVQEEFHELWAEMDEGLHPYGEDISVQVENEYYEVPCLEGEVSATTRCQRGNHYLRMDDEIGEVCRYCLHVVRDIKDCDPPFCTNRWGKSGGRYSNPLEKDDDASSSDLEQENLGCDDKYSGFETYTSTGTVWDIIPRVKKRIMYDHQQEAFEFLWTNLAGGIVLHKLEEQLDFAGGSGCIISHAPGTGKTFLTIAFLQAFMTKYPNCRPMIISPTNILHTWEKELQKWKGGVPVPFHNLNKPDLSGEESESAMSRLWKHGGRRAHTKSAIRLAKLCSWREATSILGISYTLFVWLARKGSDNMKKALFELPGLLVLDEGHTPRNSRSLVWEALSKVKTKRRIILSGTPFRIISRSFITHSAWRCQSLQD 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0726 671 MobiDBLite consensus disorder prediction 19 39 - -
Prci10g0726 671 Pfam SNF2-related domain 478 651 IPR000330 GO:0005524|GO:0140658
Prci10g0726 671 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 268 651 IPR044567 GO:0080188
Prci10g0726 671 MobiDBLite consensus disorder prediction 79 93 - -
Prci10g0726 671 MobiDBLite consensus disorder prediction 130 157 - -
Prci10g0726 671 MobiDBLite consensus disorder prediction 1 157 - -
Prci10g0726 671 MobiDBLite consensus disorder prediction 1 18 - -
Prci10g0726 671 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 472 650 IPR014001 -
Prci10g0726 671 SMART ultradead3 441 662 IPR014001 -
Prci10g0726 671 Gene3D - 424 653 IPR038718 -
Prci10g0726 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 652 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0726 Prci-Chr10 4957383 4961670 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Prci10g0726 SNF2_N 2.2e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0726 K10875 - pcin:129321920 1352.81