Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0718 ATGAAGTGTTTCTTGTTCAAATGTAAAAAAGCATCGAAGTCCTCCCCAGAATCGCAGAAAGAGAGACAGAAGAATCATCCAGGATCAAATCACGCTGTGAGTTCAGCGAGTTCGCTGCCATCACCGAGAACCATAACAGAATTGTACAAAGAGAAAGAGCACAATTTGAGAGTTTTCACTTTGCAAGAGCTCAGGGAGGCCACGAATGATTTCAATAGGATGCTCAAGATTGGAGAGGGGGGTTTTGGGAGCGTTTATAAAGGTACAATATTGTCTCAAGATGGTCGAGGTGATTCTATTGTTGTTGCGATAAAAAGCCTCAACACCCATGGCCTTCAGGGGCATAAACAATGGCTGGCGGAAGTTCAATTTCTGGGCATTGTTAATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATAGAGAAAGAGGAATCCAACGGCTTCTAGTTTATGAGTTCATGCCCAATAGGAGCCTGGAGGATCATCTTTTCAGACGGGCTTTTCCCACCTTACCCTGGAAAACAAGATTGCAGATCATGCTCGGAGCTGCCCAAGGATTACTTTATCTACACGAGGAATTGGAGATTCAGGTAATATACCGAGATTTCAAATCGTCCAATGTTTTATTGGACACGAACTTCCACCCAAAGCTCTCAGATTTTGGTCTTGCTAGGGAAGGTCCAATAGGTGATCAGACCCACGTGTCTACTGCAGTGGTAGGGACATATGGATATGCTGCCCCAGAATATATACAAACAGGCCACCTCAAAGTTCAGAGTGATATATGGAGTTTTGGCGTGGTGTTATATGAGATACTGACAGGGAGGCAGGCATTAGATAGAAGACGACCGAAAGAACAGAAGCTTCTAGATTGGGTTAAACAGTATCCTGCTGACAGTAGGAGGTTCAGCATGATAATGGACCCTCGACTCAGAAATGAGTATTCACATGGTGCTGCTCGGAAAATAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAAGAAAGGCCATCCATGAGACACGTGGTGGAAAGCTTGAAGCAAGCACTGCAGTATTCAGAAACTTCAAAAATGGCTTCTGAATCATCTCGTCCTAAATTGCTCCCAAAAAGCAAATAG 1134 0.4383 MKCFLFKCKKASKSSPESQKERQKNHPGSNHAVSSASSLPSPRTITELYKEKEHNLRVFTLQELREATNDFNRMLKIGEGGFGSVYKGTILSQDGRGDSIVVAIKSLNTHGLQGHKQWLAEVQFLGIVNHPNLVKLLGYCSEDRERGIQRLLVYEFMPNRSLEDHLFRRAFPTLPWKTRLQIMLGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFHPKLSDFGLAREGPIGDQTHVSTAVVGTYGYAAPEYIQTGHLKVQSDIWSFGVVLYEILTGRQALDRRRPKEQKLLDWVKQYPADSRRFSMIMDPRLRNEYSHGAARKIAKLADRCLNKKPEERPSMRHVVESLKQALQYSETSKMASESSRPKLLPKSK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0718 377 Gene3D Transferase(Phosphotransferase) domain 1 157 373 - -
Prci10g0718 377 ProSitePatterns Protein kinases ATP-binding region signature. 77 105 IPR017441 GO:0005524
Prci10g0718 377 FunFam Serine/threonine-protein kinase BIK1 39 156 - -
Prci10g0718 377 MobiDBLite consensus disorder prediction 8 40 - -
Prci10g0718 377 SUPERFAMILY Protein kinase-like (PK-like) 53 351 IPR011009 -
Prci10g0718 377 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672|GO:0006468
Prci10g0718 377 Gene3D Phosphorylase Kinase; domain 1 44 156 - -
Prci10g0718 377 CDD STKc_IRAK 77 353 - -
Prci10g0718 377 PANTHER OS01G0588500 PROTEIN-RELATED 23 355 - -
Prci10g0718 377 MobiDBLite consensus disorder prediction 356 377 - -
Prci10g0718 377 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0718 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Prci10g0718 377 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 157 365 - -
Prci10g0718 377 MobiDBLite consensus disorder prediction 13 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0718 Prci-Chr10 4931557 4934446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0718 3 351 Glycoside Hydrolase AT3G07070 42.500 2.72e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci10g0718 PK_Tyr_Ser-Thr 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0718 - - gmx:100305403 566.229