Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0696 ATGGTTTGTACGGCCAATGATTTACAAAGCTGGAAAGATTTTCCCAAGGGACTTAGGGTTCTTCTCCTTGATGGGGACACCAATTCTGCTGCCGATATAAGAACAAAGCTCGAGGCCATGGACTATATTGTTTCCATATTCTGCAACGAGAACGAAGCCTTGTCAGCAATTTCAAGCAAACCTGAAGGTTTCCATGTTGCCATAGTGGAGGTTAATATGAGCAATAACCAGGGATGTTTCAAATTTCTTGAGAATGCTAAAGACTTGCCAACCATTATGACTTCAAACGATCATTGCCTCAGCACCATGATGAAGTGTATAGCACTTGGTGCAGTTGAGTTCCTAAGCAAACCACTCTCTGAGGAAAAGCTCAGGAACATCTGGCAGCATGTGGTTCACAAGGCATTTAATGCTGGGGAAACTGTCCTGTCTGAATCACTGAAACCCGTCAAAGAATCTGTAGTATCAATGTTGCAGCTCCAAAGAGACAACAAGGAACATCAAAGTAAAATCACAATAGATTTAGAGAAGATATCGAGGTATAGTGAAAATGACAATGAGCTGTCAGCTGGGAGTGACAATAAATACCCAGCTCCTTCAACACCGCAATTAAAACAGGGGGCTAGATTACTGGATGATGGAGATTGCCATGAACAGACTCATTGCTTGACTGGAAAAGAAAGCGGAGAGCTGGACGGGGAAACTAAATCTGTCGAAACTACATGTGGTAATTCTAACTCTGAGGGCGCTACACCTCAACCAAGTAAGCTTGAAATGACCCTAATCAAGAAGGAAGAGGACTTTGCCAATGGTTCTAAGAGTGAGAGTGATATTTCTCCAAATAATCATGATGGAAATTTTGTTAGCAGCAATGATGATAGCACTGCATCTCCGAACAAAGTAGATGTTCACAGTGATACATGTGAGATCACAGCTAATAAAAAGAAATCAAAGAAGATGAAGGTAGACTGGACGCCTGAACTGCACAACAAATTTGTTCAGGCAGTGGAACAACTAGGTATTGATCAAGCCATACCTTCTCGAATATTGGAGCTAATGAGAGTAGAGAATTTGACGAGGCATAATGTGGCTAGCCATCTTCAGTTTTTTGTCAAACAGAAATATAGAATGCACAAGAGACATATCTTGCCCAAGGAAGAAGATCGAAGATGGTCAAATCAAAGAGATATAGTGCAAGGGAACTATTATGTACCAAGGCCAATTATGGCCTTTCCTCAATATCATGCTAATCACACCTTATCTCCAGCTCCTTTGTATCCTATATGGGGACAGCCGGGCGGACAACCGGCTGGTGTACAGATGTGGGGCCCATCTAACTATCACCTATGGCAGCCTTTTCCAGGGATGCATGCGGAAGCATGGGGTTGCCCTGTGTTGCCACCTTCTCAAAATCTTTGTTTTTCCCACACTCAACATCTGCCTGGATTGCACAATGCTAATAATGTTGAGTATAACTCTAGCATGCCTCCAAGTTCGTTAGAGCACCATCCGGCAGATGAAGTTGTTGACAAGGTTGTAAAAGAGGCAATAAGCAAGCCATGGCTACCCTTGCCCTTAGGCCTCAAACCTCCTTCCACAGATAGTGTGTTGGCTGAACTCTCTAGGCAAGGCATATCCACCATCCCTCATGGTTCTAAATTTATATAG 1668 0.4305 MVCTANDLQSWKDFPKGLRVLLLDGDTNSAADIRTKLEAMDYIVSIFCNENEALSAISSKPEGFHVAIVEVNMSNNQGCFKFLENAKDLPTIMTSNDHCLSTMMKCIALGAVEFLSKPLSEEKLRNIWQHVVHKAFNAGETVLSESLKPVKESVVSMLQLQRDNKEHQSKITIDLEKISRYSENDNELSAGSDNKYPAPSTPQLKQGARLLDDGDCHEQTHCLTGKESGELDGETKSVETTCGNSNSEGATPQPSKLEMTLIKKEEDFANGSKSESDISPNNHDGNFVSSNDDSTASPNKVDVHSDTCEITANKKKSKKMKVDWTPELHNKFVQAVEQLGIDQAIPSRILELMRVENLTRHNVASHLQFFVKQKYRMHKRHILPKEEDRRWSNQRDIVQGNYYVPRPIMAFPQYHANHTLSPAPLYPIWGQPGGQPAGVQMWGPSNYHLWQPFPGMHAEAWGCPVLPPSQNLCFSHTQHLPGLHNANNVEYNSSMPPSSLEHHPADEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISTIPHGSKFI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0696 555 Gene3D - 315 382 - -
Prci10g0696 555 FunFam Two-component response regulator 315 383 - -
Prci10g0696 555 SUPERFAMILY CheY-like 16 136 IPR011006 -
Prci10g0696 555 SMART REC_2 18 128 IPR001789 GO:0000160
Prci10g0696 555 FunFam Two-component response regulator-like APRR2 17 143 - -
Prci10g0696 555 Pfam Myb-like DNA-binding domain 322 368 IPR001005 -
Prci10g0696 555 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Prci10g0696 555 MobiDBLite consensus disorder prediction 185 201 - -
Prci10g0696 555 MobiDBLite consensus disorder prediction 185 206 - -
Prci10g0696 555 CDD REC_typeB_ARR-like 20 132 - -
Prci10g0696 555 MobiDBLite consensus disorder prediction 273 302 - -
Prci10g0696 555 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 316 375 IPR017930 -
Prci10g0696 555 SUPERFAMILY Homeodomain-like 318 372 IPR009057 -
Prci10g0696 555 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 550 IPR044825 GO:0003700|GO:0045893
Prci10g0696 555 Gene3D - 18 142 - -
Prci10g0696 555 MobiDBLite consensus disorder prediction 268 302 - -
Prci10g0696 555 MobiDBLite consensus disorder prediction 221 256 - -
Prci10g0696 555 MobiDBLite consensus disorder prediction 235 254 - -
Prci10g0696 555 NCBIfam myb-like DNA-binding domain, SHAQKYF class 319 371 IPR006447 GO:0003677
Prci10g0696 555 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0696 Prci-Chr10 4626344 4632707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0696 1 555 Response Regulator Gene Family AT4G18020 49.141 3.56e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Prci10g0696 Response_reg 2.6e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0696 - - gmx:100784905 773.467