Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0672 ATGGGTTGCTTGAACTCTAAAACAGCTCACCTTCACTCCCCTGACGATCCCTCCGCTTTCCCTGACGCTAACAAACCTGATCCAGCAAATGGGGATGATTTTGATCAAGAATGCCATGTCCCAGCATTCAAAGAGTTCGGTCTCAACGAACTCCGAAGGGCTTCGAACGAGTTCAGCACAAATTACATAGTGTCGGAGAGTGGCGAGAAAGCTCCCAATGTGGTCTACAAAGGAAAGCTCGAGAACAATCGCTTAGTCGCTATTAAACGCTTCTCCAAACAGTCTTGGCCCGACGCTCAGCAGTTTATGGCAGAGGCTGCTGGAGTTGGTAAAGTGAGGCACAAGAGACTGGTAAATCTAATTGGTTGCTGTGCTGAAGGAGACGAACGGCTTTTGGTGGCAGAGTACATGCCAAACGATACTTTGTCGAAGCATCTCTTTCATTGGGACAAGCAGCCATTGCCATGGGAAATGCGTGTAAGAGTTGCATACCATGTCGCCCAGGCACTAGATCATTGTAGCATGGAAAATCGTAAAATATATCATGATTTGAATGCATACAGGATTCTTTTTGATGAGGAAGGTGATCCCCGATTGTCAAGTTTTGGGCTTATGAAAAATAGTCGAGATGGTAAAAGCTACAGTACCAACTTAGCATATACTCCACCTGAGTTTTTGCGGACAGCCTTTGCAGGTAGGATTATCCCAGAGAGTGTAATCTACAGTTATGGAACAGTTCTTTTGGATCTTTTGAGCGGCAAGCATATTCCTCCAAGCCATGCTCTTGATCTTATAAGAGGTAAAAATGCCTTGTTGCTAATGGACTCATCCCTAGAAGGGCAATACACAAACGATGATGCTACAAAGTTGGTTGAACTTGCTTCAACATGTCTTCAGTTTGAGGCTAGAGAACGCCCAGATGTCAAGTTTCTTCTTACGGCAGTTGCACCTCTTCAAAAGCAAAAAGAGGTAGCATCTCATGTGTTGATGGGCCTGACAAAAAGTACAGCAGTGCTACCAACCATGCTTTCTCCTCTAGGAAAGGCTTGTGCAAGGATGGATCTCACAGCTGTGCATGATATATTGCTGAAAACAGGTTATAAAGATGAAGAAGGTGCTGAGAACGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGAGATCTTGAACACAAAAAAATTTGGGGATATAGCATTCAGAGACAAGGATTTCAAGAACGCAATTGAGTATTATTCCAAGTTGGTGGTGATGATGTCAGTTCCTTCGGCAACAGTATTTGCAAGAAGAGCATTCTCATACTTGATGAATGAGCAGGCAGAGCTGGCGCTACGGGATGCGATGCAGGCACAGGTGTGCATTCCTGATTGGCCAACGGCATTCTACCTGCAGGCACTTGCTCTGTCCAAGCTGGGAATGGAAACCGATGCTCAGGATATGCTTCATGACGGAGCTGCTTTTGAAGCCAAGAGGTCTAACAGTTGGCGTGGTTAA 1494 0.4525 MGCLNSKTAHLHSPDDPSAFPDANKPDPANGDDFDQECHVPAFKEFGLNELRRASNEFSTNYIVSESGEKAPNVVYKGKLENNRLVAIKRFSKQSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEEGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTAFAGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYTNDDATKLVELASTCLQFEARERPDVKFLLTAVAPLQKQKEVASHVLMGLTKSTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQEILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLHDGAAFEAKRSNSWRG 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0672 497 SUPERFAMILY Protein kinase-like (PK-like) 68 315 IPR011009 -
Prci10g0672 497 Gene3D Transferase(Phosphotransferase) domain 1 138 333 - -
Prci10g0672 497 MobiDBLite consensus disorder prediction 1 34 - -
Prci10g0672 497 FunFam probable serine/threonine-protein kinase At5g41260 138 332 - -
Prci10g0672 497 Gene3D Tetratricopeptide repeat domain 387 495 IPR011990 GO:0005515
Prci10g0672 497 FunFam probable serine/threonine-protein kinase At4g35230 387 496 - -
Prci10g0672 497 SUPERFAMILY TPR-like 392 484 IPR011990 GO:0005515
Prci10g0672 497 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 492 IPR045845 GO:0004672|GO:0009742
Prci10g0672 497 Pfam Protein tyrosine and serine/threonine kinase 74 312 IPR001245 GO:0004672|GO:0006468
Prci10g0672 497 FunFam probable serine/threonine-protein kinase At4g35230 33 136 - -
Prci10g0672 497 ProSiteProfiles Protein kinase domain profile. 61 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0672 497 Gene3D Phosphorylase Kinase; domain 1 33 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0672 Prci-Chr10 4529084 4534591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0672 14 316 Glycoside Hydrolase AT3G07070 33.129 1.87e-41 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci10g0672 PK_Tyr_Ser-Thr 7.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0672 K14500 - gmx:100793576 935.25