Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0664 ATGGGAGGTGCGGCACTGCCACCAGGTTTTCGATTCCATCCTACTGATGAAGAACTGGTGGGATATTACCTGAAAAGAAAAGTGGAGGGACTGGAAATTGAGCTTGAAGTTATCCCCGTGATTGATCTTTACAAATTTGATCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCCAGAGATCGAAAATATCCGAATGGTTCAAGAACAAATAGAGCAACCAAAGCTGGGTACTGGAAAGCCACCGGAAAAGACAGGAAGGTTGTATGCCACTCTTCTCCTTCCTCCGTCACCGGTTATCGGAAGACTCTGGTTTTCTATTGCGGTAGAGCTCCCTTAGGGGATCGAACCGACTGGGTCATGCACGAGTATCGCCTTTGTGATGATCTTGCCCCAAGATCACCGAGCTTTCAGGGTGCTTTTGCTTTATGCCGAGTAGTGAAGAAGAATGAGAAACCAAATGATTTGAAGGGAGAACACAAGGGTAAAAAGGCTGGAGGCAGTTCTGTTAATGGGAATGGCACCTCCATGAAAATCTCAAGCGAGCCTTTCAACATCTCTGGTGACGTTTCGTCACAAACCAGTCATCTGCACAATGAGAGTGGCCATTCAAGCCCTATCGCTTCTCCCTCCAATGCAGTTCAGACGTCTTCAATGGAGACTAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACGACATGCAGTGTCCGAGTACTTTCCACAGTATGACTTGTCAAGTTCAGTGACCCCATGGCAGCCATTGGAACACAGAGACATTTCGCCCTCTTCATCGTACTCAAATTTGAATGGGGAAATTGAATTTGCCGGTGATCTTAGCATGTCAACCTACATGGCACAAGCGAACTTCATGGACTCCTACGGAAATGACCCTGTGACCTATGAAGGTTTTGACCACTTCAATTCAATCACGCATCCAAGACATTTCTGA 1014 0.4556 MGGAALPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCHSSPSSVTGYRKTLVFYCGRAPLGDRTDWVMHEYRLCDDLAPRSPSFQGAFALCRVVKKNEKPNDLKGEHKGKKAGGSSVNGNGTSMKISSEPFNISGDVSSQTSHLHNESGHSSPIASPSNAVQTSSMETNPSDIWISPDFILDSSKDYPEVRHAVSEYFPQYDLSSSVTPWQPLEHRDISPSSSYSNLNGEIEFAGDLSMSTYMAQANFMDSYGNDPVTYEGFDHFNSITHPRHF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0664 337 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Prci10g0664 337 FunFam Nac domain-containing protein 86 15 162 - -
Prci10g0664 337 MobiDBLite consensus disorder prediction 178 231 - -
Prci10g0664 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 221 - -
Prci10g0664 337 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Prci10g0664 337 MobiDBLite consensus disorder prediction 163 231 - -
Prci10g0664 337 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Prci10g0664 337 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0664 Prci-Chr10 4475118 4477684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0664 1 318 NAC Transcription Factor Family AT4G17980 55.108 5.53e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci10g0664 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0664 - - gmx:100796849 516.538