Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0658 ATGGATTCTCGGGAGCCACCTCAGCCACCGCCACGCTCGCAACAGCAACCTTCGCCAGCGCTACCAAGCATTATGGTACCTCCTCGTTCTTTTTCCTCCCCCATGCCCAGCCCCGTCCCTTCTTCCATGATCAGCCCCAATTCTTCGCACATGCTGTTGGCCCCTGCCACCGCCCGATTACCCTTCACCGCAATTGTAACACAATCCCGTATTCCTCCTCCTCCGCCTCCTCCGCCTCCACCGAAGGCTTCCGAACTCACTTCTCCTTACGAAGGTTCCTCTGCGTATAGGCCCGGCGGGCTGAGTATTGATTCTCCGAAGAGGAAGAGAGGCCGGCCCAGGAAGTATTCGCCGGATGGTAGCATTGCTTTGGGATTGGCTCCTACGCCTTTGTCTTCTTCTGGCCCCGGTGATTTGAGTGCCTCGCCGTCCGGGGAACCACCAGCTAAAAAGAGCAGGGGAAGGCCGCCGGGCTCTGGAAAGAAGCAAATGGATGCTCTTGGAGCTGGCGGGACATGCTTTACTCCACATGTACTCTTGGTGAAAACCGGGGAGGACATTGGAGCAAAGATTATGGCCTTTTGTGAAGAAGGGTCACGTTCAGTCTTCATTCTTTCTGCTAATGGTGCAATCTGCAATGCCACCATTCGACAGCCAGCTACGGCTGGTGGTACAGTGTATTACGAGGGTCGATACGAGATTATATCTATATGTGGTTCTTTCAATCCATCCGAAGACGGTGGTAGTAGAACAGGTGGTTTGAGCGTCGCTCTAGCGGCGGCTGATGGAAGAATTGTGGGTGGCAGTGTTTCTGGAATGCTAATTGCAGCATCACCAATACAGGTCATTTTGGGTAGCTTTATTGCGGAGGGGAAGAAACAGACGAGCTCAAAGAAGGAGGAATCTGGGCCCTCCTCTGCAACAACGCCCACGGGAACTCAACTGTTAAATTTTGGTGCATCATCTGTGGCTCCAACCAGAGCTACCTCTCAAGGGGTTTCAAGTGATTCTTCTGATGAAGACAACGACGGCGGTAGTACCTTGCAGATGGGGTCGGGGTCTGCATCTGGGACTGGGACTGGGCCTGGGCCTGGGCCTGGGCCTGGAGTCTACAATAGTGTTAGCCAGCCCATTCGTAATATGCCATGGAGTCAACTATGGACCAGCCATCCTCCGCAGCGATGA 1185 0.5409 MDSREPPQPPPRSQQQPSPALPSIMVPPRSFSSPMPSPVPSSMISPNSSHMLLAPATARLPFTAIVTQSRIPPPPPPPPPPKASELTSPYEGSSAYRPGGLSIDSPKRKRGRPRKYSPDGSIALGLAPTPLSSSGPGDLSASPSGEPPAKKSRGRPPGSGKKQMDALGAGGTCFTPHVLLVKTGEDIGAKIMAFCEEGSRSVFILSANGAICNATIRQPATAGGTVYYEGRYEIISICGSFNPSEDGGSRTGGLSVALAAADGRIVGGSVSGMLIAASPIQVILGSFIAEGKKQTSSKKEESGPSSATTPTGTQLLNFGASSVAPTRATSQGVSSDSSDEDNDGGSTLQMGSGSASGTGTGPGPGPGPGVYNSVSQPIRNMPWSQLWTSHPPQR 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0658 394 MobiDBLite consensus disorder prediction 300 359 - -
Prci10g0658 394 MobiDBLite consensus disorder prediction 294 377 - -
Prci10g0658 394 Pfam Plants and Prokaryotes Conserved (PCC) domain 176 287 IPR005175 -
Prci10g0658 394 SMART AT_hook_2 150 162 IPR017956 GO:0003677
Prci10g0658 394 SMART AT_hook_2 107 119 IPR017956 GO:0003677
Prci10g0658 394 Gene3D - 176 305 - -
Prci10g0658 394 CDD DUF296 175 287 IPR005175 -
Prci10g0658 394 MobiDBLite consensus disorder prediction 1 41 - -
Prci10g0658 394 MobiDBLite consensus disorder prediction 64 167 - -
Prci10g0658 394 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 71 341 IPR039605 GO:0003680
Prci10g0658 394 MobiDBLite consensus disorder prediction 68 85 - -
Prci10g0658 394 SUPERFAMILY AF0104/ALDC/Ptd012-like 173 290 - -
Prci10g0658 394 MobiDBLite consensus disorder prediction 1 50 - -
Prci10g0658 394 ProSiteProfiles PPC domain profile profile. 171 310 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0658 Prci-Chr10 4417160 4422395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0658 100 319 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 49.597 1.20e-63 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0658 - - pcin:129322642 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0658 10 4417160 4422395 Prci5g0379 5 5151067 5157064 CCT