Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0652 ATGGCTCCTCCAGAGATTGCCCTCGCGTCCATGACCAGACACCCTCCCAATCAGCCAAACCCTAAAATGTGGAACCCCGAAGAAGATGACTCCTGGGAGGTCAGAGCTTTTGCGGAGGACACGCGAAACGTCATGGGAACCACTTGGCCCCCCAGGTCCTACACCTGCACCTTCTGCAGAAGGGAGTTCCGTTCCGCCCAAGCTCTCGGCGGTCACATGAACGTCCACCGCCGTGACCGGGCTCGCCTCCACCAAGTCCAGCCCAACTCTTCGATCATAATCCCAGCGCAAGACCTCGTTCCTAATAATGGCTTGTGCCTTCTCTATCGTTTACCACCAGCGCCTAATAATCCCACCTTTGCCTTCGCCAACACTGGTCCTACCCCAACTGATCCCAGTGCATTTGCTGAATCACCTTCCTCTCTCCTCTCCATCTCGCCCTATCCACCCAACAAGTTCGATTTTTCTGTGCTGCGCTCCGGCTGCAATATTTCCTCTTTCTCTAATAACTCCACCGAAGTGGAACTGCCCACAACCAACTCCTCCGATGACGGCAGCGAAGAGCTCGATCTAGAGCTCCGGCTAGGCCACGGGCCAACACCGACCTGA 609 0.5599 MAPPEIALASMTRHPPNQPNPKMWNPEEDDSWEVRAFAEDTRNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQVQPNSSIIIPAQDLVPNNGLCLLYRLPPAPNNPTFAFANTGPTPTDPSAFAESPSSLLSISPYPPNKFDFSVLRSGCNISSFSNNSTEVELPTTNSSDDGSEELDLELRLGHGPTPT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0652 202 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Prci10g0652 202 PANTHER OS07G0101800 PROTEIN 23 198 - -
Prci10g0652 202 MobiDBLite consensus disorder prediction 168 184 - -
Prci10g0652 202 Pfam C2H2-type zinc finger 54 78 - -
Prci10g0652 202 Gene3D Classic Zinc Finger 43 99 - -
Prci10g0652 202 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Prci10g0652 202 SMART c2h2final6 54 76 IPR013087 -
Prci10g0652 202 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Prci10g0652 202 MobiDBLite consensus disorder prediction 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0652 Prci-Chr10 4356874 4358351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0652 23 199 C2H2 Transcription Factor Family AT4G17810 43.386 2.92e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci10g0652 zf-C2H2_6 3.9e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0652 - - pcin:129284523 413.69