Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0647 ATGGAGACTTCATCCAAGTACTTCGCTGAGCTAGGAATGGAGGATCCGAGCATATTCGAGCAGTACCCGGTGGAGTGGGGGTACGAGGTTGATGACTTCCAGGATAGCTACTCGTGTTTCAACTCCAAAAGAAGCCGTAATGAATGGTTCCCGGTGGAGAGTCCGGATTCGGTTGCCCAACCAAGAGAAAGCAAGCAACTAAAGAGCAGCAACCACAACATTAGCTGGACCTCCTATTGCACCCCTACAACAATCGCTGACCCCTTCATTCCTTCCAACCATTCTGCTTCTAATTCCACCTCCCAAATCCTCTCTTTCGAGAACTCTAACTCATCCCCCGACGTCGCTTCTCACCAATTTTACAGCTTGGATTCTAGTACTGTGGTCAAGCCTAAAACGGAGGCTGTTTTCTCTGCTGATAACCTGGACTTCAGTGCACCATTTTCCATTTCTCAACCCAATTATGACCACAAACCTGATTCCTTTTTTCTCCCACATGAGAGAAAACCTGCCATCATCACCAGAAATCCCGTCCAAGCTCAAGATCACGTCATGGCCGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTTATTGCTCTTTCGGCCATTCTTCCCGGGCTCAAAAAGATGGATAAGGCTTCAGTCCTAGGAGATGCTATCAACTATGTGAAACAACTACAGGACCGCGTGAAGACTCTGGAGGAACAGGTAGCCAAGAAGGCCGTTGAGACCGCAGTTTTCGTCAACAGGTCTGTTCTCTATGCCGACGATGATTACTCCTCATCCGATGAAAATTCCAACAGCCACTCCCTCCGGCCATTGCCCGAAATCGAAGCAAGAGTTTCGGGCAAGGAGGTACTCATCAGAATCCACTGTGACAAACACAATGGAAATGCAGCCACCATACTCACCCAGTTACAACATCTTCATCTCACTGTCCAGAGCAGCAGCTTCTTGCCCTTCGGGAATGCCACTCTTGATATTACTATTGTTGCTCAGCTGAACAAGGAACAGCGCGTGACAGCAAAGGACATAGTGAGAAGTCTGGGGCAGGGTCTGAGGCAATTAAATTGA 1077 0.4838 METSSKYFAELGMEDPSIFEQYPVEWGYEVDDFQDSYSCFNSKRSRNEWFPVESPDSVAQPRESKQLKSSNHNISWTSYCTPTTIADPFIPSNHSASNSTSQILSFENSNSSPDVASHQFYSLDSSTVVKPKTEAVFSADNLDFSAPFSISQPNYDHKPDSFFLPHERKPAIITRNPVQAQDHVMAERKRREKLSQRFIALSAILPGLKKMDKASVLGDAINYVKQLQDRVKTLEEQVAKKAVETAVFVNRSVLYADDDYSSSDENSNSHSLRPLPEIEARVSGKEVLIRIHCDKHNGNAATILTQLQHLHLTVQSSSFLPFGNATLDITIVAQLNKEQRVTAKDIVRSLGQGLRQLN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0647 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Prci10g0647 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 245 IPR036638 GO:0046983
Prci10g0647 358 Coils Coil 217 244 - -
Prci10g0647 358 SMART finulus 184 233 IPR011598 GO:0046983
Prci10g0647 358 Gene3D - 173 242 IPR036638 GO:0046983
Prci10g0647 358 CDD bHLH_AtNAI1_like 180 252 - -
Prci10g0647 358 Pfam Helix-loop-helix DNA-binding domain 181 228 IPR011598 GO:0046983
Prci10g0647 358 PANTHER BHLH TRANSCRIPTION FACTOR 53 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0647 Prci-Chr10 4317773 4320058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0647 4 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.465 3.76e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci10g0647 HLH 5.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0647 - - gmx:100798011 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0647 10 4317773 4320058 Prci5g0373 5 5020605 5022559 CCT