Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0632 ATGAAGTCTGCGGAGAATGGTGATAACCATGGTCATGAAAACAACTGGTTGGGTTTCTCTCTCTCCCCTCACATGAGTCTAGACGTTCCTTCTGACTGTAATGACCAACATCAACAAGAGATCCAAGTGATACGGCCTTCCTCTGCCGCTGCAGATGCCGTTCCGGCGAGCTTTTATCACTCCATGCCCCTTCCTCCTAATTATGGCATTTACTGTGGTGGGCTTGATGGTGAAAATGTCGGCTTCTATTCCTCTCTCCCTGTCATGCCCCTAAAATCTGATGGCTCTCTCTATGTAATGCAGTCACAGCCCCAAGTGGCATCGTCTTCAACCCCGAAACTGGAGAATTTCTTGAGCAGCTCGACAATGGGGACCTTGAGCTTAGACAGCATGATTTTCGCCAACCAGTCCTCGCGTCGAGAACTCAACAACCCAAACTATCTAAACCGCGTCGAACAAGGGCAAGACATCCAGGCCCAACCTTTCTTATCATACTATTCTGGCTTTAGAAGCCGTGAAATGATGTTGGAAGGGCCCAAGCAAAATGAAGTTTCAGACTGTAATGTCCAGTTCCCAAATATTGGACAGGAGGGAGCTTCAGGAATGAAGAACTGGGGCATAAGAATCAGCCCAGCAGGTCATGCACACGAGTCAGAGATGATGGTTAGTGTGGAGGATAATAATGGTGGCGAATCTGGGTCCATCGGATCAGTGGCGTATGGGGATTTGCAGTCACTGAGCTTGTCCATGAGTCCTGGCTCACAATCAAGCTGCGTCACAAGTTCGCAGAGAGCTTCGCCTTCTGTCAATGATTCTGTTGGCGTGGATACGAAGAAAAGAGGACCTGAAAAGTTTGACCAGAAACAAATTATTCACCGGAAATCCATAGATACTTTTGGCCAACGAACATCCCAATATAGAGGTGTAACAAGACACAGATGGACTGGTAGATATGAAGCTCATCTTTGGGACAACAGTTGCAAGAAAGAGGGTCAGAGTAGGAAAGGAAGGCAAGTTTATCTAGGCGGTTATGATATGGAAGAAAAAGCGGCAAGAGCTTATGATCTGGCCGCACTCAAGTATTGGGGACCCTCCACTCATATCAATTTCCCATTGGAGAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACTAGACAGGAATACGTAGCTCATTTGCGGAGGAAAAGCAGCGGATTCTCCAGAGGTGCTTCCATGTACAGAGGAGTAACAAGACATCATCAACATGGGCGGTGGCAAGCTCGAATCGGTAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAGGCATATGACATTGCAGCTATTAAATTCCGTGGAGTAAACGCTGTGACCAACTTTGATATAACAAGATATGATGTGGAAAAAATCATGGCTAGCAGTAACCTTCTTAGTGGTGAACTAGCCAGGCGGAACAGAGAGATCGATGGTGGTAACGATCGGGCTATCGTTCCTTTAAGCACAGCATACGTTGGAAACCAGGATGCGATTTCAATGCACAAGAGCTGCGAAGGCCAGTCATCAGAGTGGAAGCTGGGAACGCATATCTTAAATCGTTCCCAATGGATGACGGAACTCGACCAAAATCCAGCAAGAATGGAGACTTATAGAACTCAATCCTTCTCAATACCTTTAGATAACATGATCCATCAAGTAGACGAATCAACCAAGATGGGAACGCACGTTTCAAATCCTTCATCTTTAGCGACAGGCTTGAGCAGCTCACGTGAAGTTAGCCCTGAGAAAACAAGCTTGCCAATTCTCACTGAAGCGCCTTCGCTAGTGACAAGCTTGAGGCCACCACTTTCACTGCCCCATGTGCCGGTGTTTGCTGCATGGACGGATACTTGA 1902 0.4669 MKSAENGDNHGHENNWLGFSLSPHMSLDVPSDCNDQHQQEIQVIRPSSAAADAVPASFYHSMPLPPNYGIYCGGLDGENVGFYSSLPVMPLKSDGSLYVMQSQPQVASSSTPKLENFLSSSTMGTLSLDSMIFANQSSRRELNNPNYLNRVEQGQDIQAQPFLSYYSGFRSREMMLEGPKQNEVSDCNVQFPNIGQEGASGMKNWGIRISPAGHAHESEMMVSVEDNNGGESGSIGSVAYGDLQSLSLSMSPGSQSSCVTSSQRASPSVNDSVGVDTKKRGPEKFDQKQIIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASSNLLSGELARRNREIDGGNDRAIVPLSTAYVGNQDAISMHKSCEGQSSEWKLGTHILNRSQWMTELDQNPARMETYRTQSFSIPLDNMIHQVDESTKMGTHVSNPSSLATGLSSSREVSPEKTSLPILTEAPSLVTSLRPPLSLPHVPVFAAWTDT 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0632 633 MobiDBLite consensus disorder prediction 251 280 - -
Prci10g0632 633 SMART rav1_2 407 471 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 SMART rav1_2 305 377 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 Pfam AP2 domain 305 363 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 Pfam AP2 domain 408 457 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 FunFam AP2-like ethylene-responsive transcription factor ANT 304 373 - -
Prci10g0632 633 MobiDBLite consensus disorder prediction 251 273 - -
Prci10g0632 633 SUPERFAMILY DNA-binding domain 406 466 IPR016177 GO:0003677
Prci10g0632 633 Gene3D AP2/ERF domain 304 373 IPR036955 GO:0003700|GO:0006355
Prci10g0632 633 Gene3D AP2/ERF domain 407 467 IPR036955 GO:0003700|GO:0006355
Prci10g0632 633 MobiDBLite consensus disorder prediction 575 601 - -
Prci10g0632 633 PRINTS Ethylene responsive element binding protein signature 306 317 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 PRINTS Ethylene responsive element binding protein signature 447 467 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 SUPERFAMILY DNA-binding domain 304 373 IPR016177 GO:0003677
Prci10g0632 633 CDD AP2 304 371 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 MobiDBLite consensus disorder prediction 575 599 - -
Prci10g0632 633 CDD AP2 406 467 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 495 - -
Prci10g0632 633 ProSiteProfiles AP2/ERF domain profile. 305 371 IPR001471 GO:0003700|GO:0006355
Prci10g0632 633 FunFam AP2-like ethylene-responsive transcription factor 406 467 - -
Prci10g0632 633 Coils Coil 372 392 - -
Prci10g0632 633 ProSiteProfiles AP2/ERF domain profile. 407 465 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0632 Prci-Chr10 4149823 4153959 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0632 1 633 AP2-EREBP Transcription Factor Family AT4G37750 43.924 1.50e-152 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci10g0632 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0632 K09285 - gmx:100792451 765.377