Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0629 ATGTTGTCCACTCTCTCCCCTTCCCACCCTTTCCTTGGAAACCCGTTCTCCTCCTTCGAAGGCGGCCTAACGCCTTGGGAGTTCCCGGACCTTTCCTCCGTCTTCAATTCTACCGACCCCGTCATTAATTCAAGTTCCGGTTCAGACGAACCGGATCGAACCCATAATGCCAAGAGAAAATCCCCCTCCTCAGATGATCAACCGGACCGTCCAGATTTTGTCATGGAGGACCGAAAGCGGAGGCGGATGATATCGAACCGGGAGTCGGCAAGACGTTCACGCATGCGTAAACAGAGACATCTAGAGAACTTACGGAACGAGGTGAACCGATTTAGGATGGAAAACCGAGACCTGAAGAACCGGATGCAGTTCTTGCTCCATCTCACTAACCGCGCACGAACCGAAAACGAATGGCTCCGGTCCGAGCGAATCATGCTCCGGCAAAAACTGTTGACCCTAACTCAATATTTGGTCTTCCAACAACCGCAACGCGTCTCATCTGCATGGCCATGCAATACTAGCGTCACAGCGAGAATAAACCTTGATCGTTATATGAGCAACTAA 564 0.5124 MLSTLSPSHPFLGNPFSSFEGGLTPWEFPDLSSVFNSTDPVINSSSGSDEPDRTHNAKRKSPSSDDQPDRPDFVMEDRKRRRMISNRESARRSRMRKQRHLENLRNEVNRFRMENRDLKNRMQFLLHLTNRARTENEWLRSERIMLRQKLLTLTQYLVFQQPQRVSSAWPCNTSVTARINLDRYMSN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0629 187 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
Prci10g0629 187 Pfam bZIP transcription factor 76 125 IPR004827 GO:0003700|GO:0006355
Prci10g0629 187 SUPERFAMILY Leucine zipper domain 78 127 IPR046347 GO:0003700|GO:0006355
Prci10g0629 187 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Prci10g0629 187 CDD bZIP_plant_GBF1 79 130 IPR045314 GO:0003700|GO:0006355
Prci10g0629 187 Coils Coil 87 121 - -
Prci10g0629 187 Gene3D - 77 132 - -
Prci10g0629 187 MobiDBLite consensus disorder prediction 51 91 - -
Prci10g0629 187 FunFam BZIP transcription factor 76 127 - -
Prci10g0629 187 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 160 - -
Prci10g0629 187 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 125 IPR004827 GO:0003700|GO:0006355
Prci10g0629 187 MobiDBLite consensus disorder prediction 37 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0629 Prci-Chr10 4122762 4123651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0629 1 163 bZIP Transcription Factor Family AT2G22850 35.185 1.97e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g0629 bZIP_1 4.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0629 - - pcin:129323153 369.777