Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0601 ATGATGGATACCTTGTTTAGGGTACTCAATTTTCAACATCAACCTCAGCCCGATCACTCCCTCAACTCCACCACCAGCCTCACTACTTCTGGCAGCTCTAAATCTTCCATGCACAATTGCTTCCCCCCGCCACAGCACCAAGAAGAATGCTTCAACCTTTTCATGGATGAAGAAGACTTATCTTCGTCTTCTTCTAAGCACTGCTATCCCTGTCATCTCCATCCTTCCCCCGCTACCGCGGCCGATTTTTCCTTCTCACCCACCAGTGACTTCAACTCGGAATTCTCCGGCAACGCCAGGTGGGTTTCCGATATCCTCATCGAGACAGCTCGTGCCTTTGCCGACAAGAACAGCCCCCGTATCCAGCAACTCATGTGGATGCTTAACGAACTCGCCTCCCCTTATGGCGACGCTCATCAGAAACTCGCCTCTTATTTCCTCCAAGCCTTGTTCGCTCGCATGACCGACTCTGGCCTCCGTACCTACCGTATCTGGACCTCCGCGTCTGACAAGAACTGCTCCTTTGAATCCACCAGGAAGACCGTCTTGAAGTTCCAGTAG 561 0.5187 MMDTLFRVLNFQHQPQPDHSLNSTTSLTTSGSSKSSMHNCFPPPQHQEECFNLFMDEEDLSSSSSKHCYPCHLHPSPATAADFSFSPTSDFNSEFSGNARWVSDILIETARAFADKNSPRIQQLMWMLNELASPYGDAHQKLASYFLQALFARMTDSGLRTYRIWTSASDKNCSFESTRKTVLKFQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0601 186 ProSiteProfiles GRAS family profile. 93 186 IPR005202 -
Prci10g0601 186 MobiDBLite consensus disorder prediction 16 41 - -
Prci10g0601 186 Pfam GRAS domain family 104 171 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0601 Prci-Chr10 3964905 3967016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0601 2 186 GRAS Transcription Factor Family AT4G37650 43.668 3.24e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci10g0601 GRAS 2.4e-12 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0601 - - pcin:129322746 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0601 10 3964905 3967016 Prci10g0601 10 3964905 3967016 ECH