Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0600 ATGGGGAAGAAGCAGCATAGCAAAGATCGGATGTTTATCACTAAAACAGAGTGGGCGACGGAATGGGGAGGGGCCAAATCCAAGGAAAATCGTACCCCATTCAAACGACTTCCTTTCTATTGCTGCGCGCTTACATTTACACCGTTCGAGTATCCGGTATGCACAGCTGATGGAAGCGTTTTTGATGTTATGAATATAACCCCGTATATTATCAAGTATGGAAAGCATCCTGTCAGTGGAGCTCCGCTTAATCAGGACGACCTCATTCCACTAACTTTCCACAAGAATTCAGATGGGGAATATCAGTGCCCTGTGCTGAACAAAGTTTTCACTGAATTCACACATATTGTAGCTGTAAAGACCACAGGAAACGTTTTCTGCTATGAGGCCATCAAAGAATTAAACATCAAGACGAAAAACTGGAAGGAGCTCTTGACTGATGAGCCATTCACTAAGGATGACCTCATAACTATTCAGAATCCCAACGCACTTGACAGCAAGGTTCTTCTGGATTTTGACCATGTTAAAAACAATTTAAAAGTTGATGATGAAGAACTAAATAGAATGGGTTCAGATCCAACCTATAATATAAATGTGTCTGGAGATATCAAACAAATGCTTCAGGAGCTTGGAACTGAGAGAGCAAAGGAAACTGCATTGCATGGGGGAGGTGGGAGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTACTGCCATATTAGATGCAAGGTCACGTTTGAAGGAGGATTCCAAGTCAAATGGAGATGCTAAAGCACCTCAGGGATTTAGTATAGTAGACGCTGCTTCTGCTTCAGTGCATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCACTTGGCTGGTGAGAGGGCTCCATTAAATGGGAAGCTGGTAAAAAGCCGATTCACAACTGGTGCTGCTTCAAGATCCTTTACTTCGACATCTTTTGACCCAGTTACAAAAAATGAATATGAATATGTAAAAGTGGAGAAAAATCCGAAAAAGAAAGGATATGTACAATTGCATACAACTCATGGAGATTTGAACATTGAGCTGCACTGTGATATAGCACCCAGGACGTGTGAAAACTTTATCACACTTTGTGAGCGTGGTTATTATAATGGGGTTGCATTTCATAGGAATATACGGAATTTTATGATACAAGGTGGCGATCCTACTGGGACTGGGAGAGGAGGTGAATCAATATGGGGAAAACCATTTAAAGATGAAGTTAACTCCAAATTACTTCATTCTGGGAGGGGTGTTGTTAGCATGGCAAATAGTGGTCCACACACCAATGGCTCCCAGTTTTTTGTCCTCTACAAATCTGCAAATCATTTAAACTATAAACACACAGTTTTTGGCGGAGTGGTTGGTGGCTTGACAACATTGGCAGCCATGGAAAAGGTTCCTGTTGATGACAATGACCAACCTCTGGAGGAAATCAAGATAACAAATGTCACAGTTTTTGTCAATCCCTACACAGAACCGGATGAGGAAGACCAGGAGAAGGCTGATGTGAAGAATGCGGAGGATGAAGATAATGATAAGGTTGGAACATGGTATAGTAATCCTGGTGCGGGAACATCTGAATCTGGAGGCGTGGGTGGTGGTGGTGGTGGTGGTGTTGGCAAGTACTTGAAAGCCAGGAATGCTCAAGATTCTGCTACTGTTGACAATAGCACATCAGTTGCAGGGAAGAAAAGAAAAGTGGGGGTTGCCAGCGGTGAATTTAAAGACTTTTCAGCATGGTAG 1785 0.4286 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFEYPVCTADGSVFDVMNITPYIIKYGKHPVSGAPLNQDDLIPLTFHKNSDGEYQCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDEPFTKDDLITIQNPNALDSKVLLDFDHVKNNLKVDDEELNRMGSDPTYNINVSGDIKQMLQELGTERAKETALHGGGGSKAQKERAAALTAILDARSRLKEDSKSNGDAKAPQGFSIVDAASASVHGRSAAAAKASSSDKTAARIAMHLAGERAPLNGKLVKSRFTTGAASRSFTSTSFDPVTKNEYEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDIAPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFKDEVNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSANHLNYKHTVFGGVVGGLTTLAAMEKVPVDDNDQPLEEIKITNVTVFVNPYTEPDEEDQEKADVKNAEDEDNDKVGTWYSNPGAGTSESGGVGGGGGGGVGKYLKARNAQDSATVDNSTSVAGKKRKVGVASGEFKDFSAW 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0600 594 MobiDBLite consensus disorder prediction 504 582 - -
Prci10g0600 594 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Prci10g0600 594 Gene3D - 326 513 IPR029000 -
Prci10g0600 594 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 342 513 IPR044666 -
Prci10g0600 594 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 329 513 - -
Prci10g0600 594 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Prci10g0600 594 SUPERFAMILY RING/U-box 37 104 - -
Prci10g0600 594 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 348 499 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 MobiDBLite consensus disorder prediction 507 528 - -
Prci10g0600 594 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 383 400 IPR020892 GO:0003755|GO:0006457
Prci10g0600 594 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 459 474 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 446 458 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 362 377 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 431 446 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 388 400 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Prci10g0600 594 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Prci10g0600 594 MobiDBLite consensus disorder prediction 212 231 - -
Prci10g0600 594 CDD cyclophilin_RING 348 506 - -
Prci10g0600 594 SUPERFAMILY Cyclophilin-like 348 506 IPR029000 -
Prci10g0600 594 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 352 499 IPR002130 GO:0000413|GO:0003755
Prci10g0600 594 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0600 Prci-Chr10 3957682 3962141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0600 1 594 U-box Gene Family AT5G67530 75.748 0.0 906
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0600 K10598 - gmx:100819923 1013.83