Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0593 ATGATGGCTGATACAAAGAAATTGATTCCTCTTCCACCTCCTCATCCCCATCCAGTCGTAGCCAGTTGTTCTTGCAAGGATGTAATTATGAGAAATTCACCGCCAAGAGGACGTAATTATGTTTCCGTAGCAACAAGAGATTTGTGGGAGCGTCTTTTTGATGAAGGTTATAAAGCAGATGTTTTCATTAATACTGATAATGGTGGCATTATTTACGCGCATTCTTATATTATTGCCATGGCTTCTCCAGTGATGAGAGGCATGCTTAAGCGAGCAAGACGTCATCGTCATATGAAATCAATCTCAATTTCTGGGGTTCCACATGGCGCTGTTCGTGTTTTCATTCGATTTTTGTATTGTTCCTGTTACGAGAAAGAAGAGATAAAGGAATTCGGGTTACATTTGTTGGTTCTGTCACATGTATTTGCGGTTCCCCACTTGAAGCGCGAGTGTGAACAGGAGCTAGAATCGAATTTCCTCACCATCGACACTATGGTTGATGTGTTTCAACTTGCATTACTATGTGATGCTCCCCGCCTTATCCTCATTTGTCACCGTCGCATCCTAAAAAATTTTAAAGCAGTTTCTGAGTCCGAAGGGTGGAAGGCTATGAAAGAGAGCCACCCAACTCTTGAGAAGGAACTTCTGGAGTCTCTGATTGAGGAAGAAAATAGCACAAAGGAGAGGATAAGAAAAATGAATGAGAAGAAAATTTATCTTCAATTATACGAGGCAATGGAAGCTCTGGTTCACATATATAGAGATGGTTGTCGAACCATTGGACCACATGACAAAGACTTCAAAGAAAACCAAGCGCCGTGTAGTTTTGCAGCCTGCAAGTGCTTAGAATTGCTTGTCCGTCATTTTGCTTCCTGTAAGTTGAGAGTCCCTGGTGGTTGCAATCATTGCAAACGGATGTGGCAGCTATTGGAGTTGCACTCTCGAATATGTGCCGATCCAGATAACTGTAGAGTTCCTTTGTGCAGGAACTTTAAGGAGAGAATATCAAAACAAAGCAAGAAAGATGAAGTTAGGTGGAGAATACTGGTAGAAAAAATCTTGAGAACTAAGGGCGTTGCGCTAGCACCATTCTTTCAAAAACAATGA 1107 0.4164 MMADTKKLIPLPPPHPHPVVASCSCKDVIMRNSPPRGRNYVSVATRDLWERLFDEGYKADVFINTDNGGIIYAHSYIIAMASPVMRGMLKRARRHRHMKSISISGVPHGAVRVFIRFLYCSCYEKEEIKEFGLHLLVLSHVFAVPHLKRECEQELESNFLTIDTMVDVFQLALLCDAPRLILICHRRILKNFKAVSESEGWKAMKESHPTLEKELLESLIEEENSTKERIRKMNEKKIYLQLYEAMEALVHIYRDGCRTIGPHDKDFKENQAPCSFAACKCLELLVRHFASCKLRVPGGCNHCKRMWQLLELHSRICADPDNCRVPLCRNFKERISKQSKKDEVRWRILVEKILRTKGVALAPFFQKQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0593 368 ProSiteProfiles BTB domain profile. 59 127 IPR000210 GO:0005515
Prci10g0593 368 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 35 362 IPR044513 -
Prci10g0593 368 FunFam BTB/POZ and TAZ domain-containing protein 2 161 231 - -
Prci10g0593 368 FunFam BTB/POZ and TAZ domain-containing protein 2 233 358 - -
Prci10g0593 368 ProSiteProfiles Zinc finger TAZ-type profile. 233 331 IPR000197 -
Prci10g0593 368 Gene3D - 161 234 - -
Prci10g0593 368 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Prci10g0593 368 Pfam TAZ zinc finger 243 328 IPR000197 -
Prci10g0593 368 CDD BACK 161 204 - -
Prci10g0593 368 SMART TAZ_2 236 329 IPR000197 -
Prci10g0593 368 SMART BTB_4 59 159 IPR000210 GO:0005515
Prci10g0593 368 Pfam BTB/POZ domain 51 157 IPR000210 GO:0005515
Prci10g0593 368 SUPERFAMILY TAZ domain 236 337 IPR035898 -
Prci10g0593 368 Coils Coil 213 236 - -
Prci10g0593 368 Gene3D TAZ domain 235 356 IPR035898 -
Prci10g0593 368 SUPERFAMILY POZ domain 44 124 IPR011333 -
Prci10g0593 368 Gene3D Potassium Channel Kv1.1; Chain A 38 160 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0593 Prci-Chr10 3898520 3901906 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Prci10g0593 BTB 1.5e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0593 - - qsa:O6P43_033903 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0593 10 3898520 3901906 Prci10g0593 10 3898520 3901906 ECH