Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0586 ATGGGACAACACTCTGAGACGGTGGTGGTGAGAGTATTCGAGGCCGACAAGGACCGAGAGAGAGTGGAAGCCATGGAAAGGATATGCGAGGTCGGACCCAGTGGGAAGCTCTCCCTATTCACCGACCTCATGGGTGACCCGATTTGCAGGGTCCGCAACTCGCCTGCCTTTCTCATGCTGGTAGCTGAGATGGGCCAAGAGATAGTAGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGGAAGAAGCTGTCCAGAAACGTGAAGAACCCCCATTTGAATATCAACGACGTCCCTGAGATCTTCCAGGCTGCTCCCAGACACGTTCCTGTGTACACCAAAGTCGCTTACATTTTAGGCCTGCGCGTCTCGCCTTCTCACCGGAGAATGGGAATAGGGTTGAAGCTGGTGCGCAGAATGGAAGAGTGGTTCATAGATAATGGGGTCGAGTACTCGTATATAGCGACGGAAAACGACAATTTAGCATCCGTTAAGCTCTTCACCGACAAATGCGGATACTCCAGATTCCGTACCCCCTCCATCCTTGTCAACCCCGTTTACGCTCACAGAGAGAAGGTCTCTCGCAAGGTCACCATCATTCCACTCAGCCCCGACGACGCCGAATCCCTCTATCGTCGTCGCTTCGCCACCATCGAGTTCTTCCCTCGCGACATTGATTCCATCCTCAACAACAAACTCAGTCTCGGGACCTTCCTCGCCCTCCCAAGTGGGTCCTACTGCGCAGATACATGGCCCGGCTTGGATCACTTCCTGTCGGACCCACCAGAGTCCTGGGCAGTGCTCAGCGTCTGGAACTGCAAGGACGTGTTCACGCTCGAAGTGCGGGGCGCGTCGTGCGTGAAGCGCACCCTCGCGAAAACGACCCGAATGGTGGACCGGGCCTTCCCGTGGCTGAGACTGCCGTCCATCCCGAACTTCTTCAGACCGTTCGGACTCCACTTCCTGTACGGACTGGGAGGTGAAGGCCCGGAAGCGGTGAAGATGGTGAGAGCCCTGTGCGGGTTCGCGCATAATCTGGCCAAGGAACGCGGGTGCGGGGTGGTGGCGACGGAGGTCTCTAGCTGCGATCCTCTCAGGGTCGGAGTACCTCACTGGAAGATGTTATCCTGCGACGAGGATTTATGGTGCATCAAGAGGCTCGGGGAAGACTACAGTGACGGCTCTGTGGGTGACTGGACCAAATCTCCAGCCGGATGGTCCATTTTTGTTGACCCCAGAGAGTTTTAA 1251 0.5604 MGQHSETVVVRVFEADKDRERVEAMERICEVGPSGKLSLFTDLMGDPICRVRNSPAFLMLVAEMGQEIVGMIRGCIKTVTCGKKLSRNVKNPHLNINDVPEIFQAAPRHVPVYTKVAYILGLRVSPSHRRMGIGLKLVRRMEEWFIDNGVEYSYIATENDNLASVKLFTDKCGYSRFRTPSILVNPVYAHREKVSRKVTIIPLSPDDAESLYRRRFATIEFFPRDIDSILNNKLSLGTFLALPSGSYCADTWPGLDHFLSDPPESWAVLSVWNCKDVFTLEVRGASCVKRTLAKTTRMVDRAFPWLRLPSIPNFFRPFGLHFLYGLGGEGPEAVKMVRALCGFAHNLAKERGCGVVATEVSSCDPLRVGVPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPAGWSIFVDPREF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0586 416 Pfam Acetyltransferase (GNAT) family 56 174 IPR000182 GO:0016747
Prci10g0586 416 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 45 177 IPR016181 -
Prci10g0586 416 FunFam Probable N-acetyltransferase HLS1-like 17 181 - -
Prci10g0586 416 CDD NAT_SF 59 152 - -
Prci10g0586 416 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 194 IPR000182 GO:0016747
Prci10g0586 416 Gene3D - 42 181 - -
Prci10g0586 416 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0586 Prci-Chr10 3846905 3849252 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci10g0586 Acetyltransf_1 2.5e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0586 - - qsa:O6P43_024561 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0586 10 3846905 3849252 Prci5g0292 5 4088776 4090900 CCT
Prci10g0586 10 3846905 3849252 Prci10g0586 10 3846905 3849252 ECH