Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0579 ATGAGTTGCAACGGTTGCCGAGTGCTTCGAAAAGGTTGCAGTGAGTCTTGTATTCTGCGGCCTTGCTTGCAGTGGATCGATACGCCCGAAGCCCAAGGACATGCCACTGTCTTCGTAGCCAAGTTCTTTGGCCGCGCTGGTCTCATGTCCTTCATCTCCAACGTTCCTGAGAATCGAAGACCCGCTCTGTTTCAGTCCTTGTTGTTCGAAGCATGTGGGCGAACGGTGAATCCGGTGAACGGAGCGGTCGGGCTTTTGTGGACAGGAAACTGGCACGTGTGCCAGGCTGCCGTTGAGACGGTGCTGCGTGGTGGTACGTTAAGACCCATTCCCGAGCTTCTAGGCTTGGCTGCTCCTACTCTGGCTGCAGACGAGGCATCCGAGGCGGAAGTTGCGTGCACCGACATGTGGAGCATCAGGGATCCGAACCTGAGTTCCCGGTTCACTAATTCGCGATCTAACAAGTTCTCTTCCTGCAAACGCAAGCCATCAGATGAATCCAAGCAGCCTCAAACGGCTGATCTTGATCTCCGGCTGATGCCTACTTTCCTGCAGAAAGGGTCAGGCTACAGCTGCAGACCGGAAATCGGTCGGCCGGGTACCCCGTCGATGAACTCTGAAGAATCCGTGACGACGATGGCGTGCTTGGAGAGTGGACCTGGAGTTTACTACGCACACGCCGGAGAGCCCAAACTTCTCAATTTTTTCGCGTGA 714 0.5532 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRAGLMSFISNVPENRRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPIPELLGLAAPTLAADEASEAEVACTDMWSIRDPNLSSRFTNSRSNKFSSCKRKPSDESKQPQTADLDLRLMPTFLQKGSGYSCRPEIGRPGTPSMNSEESVTTMACLESGPGVYYAHAGEPKLLNFFA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0579 237 MobiDBLite consensus disorder prediction 158 172 - -
Prci10g0579 237 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Prci10g0579 237 MobiDBLite consensus disorder prediction 150 175 - -
Prci10g0579 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
Prci10g0579 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0579 Prci-Chr10 3803402 3804801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0579 1 237 AS2 family AT3G49940 56.977 2.22e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci10g0579 LOB 9.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0579 - - gmx:100816189 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0284 5 4011898 4013223 Prci10g0579 10 3803402 3804801 CCT
Prci10g0579 10 3803402 3804801 Prci5g0284 5 4011898 4013223 ECH
Prci10g0579 10 3803402 3804801 Prci10g0579 10 3803402 3804801 ECH