Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0578 ATGTCGACGCAGTTCACTCCTTCCCCTCCTTCTCTGCACCAAATCGCCGCCCCTTTCTCCGGCCTTTCCATGAACAAGAATAATCAAATTCTCAAGACGCGACCCTGGCCTGGCTTCCCTTCCTCCAAGGCCTTCAATTCCTTCGGTGATGCCACTTGCATGGAGCAATTGCTTGTTCACTGCGCCAACGCCATCGAATCCAACGACGTCACTCTCGCCCAGCAAATCCTCTGGGTTTTGAACAACATCGCTCCCCCAGACGGCGACTCCAATCAGCGCCTCGCTTCCGCCTTCAACCGCGCTCTGGCAGCACGTGCTGCCAAATCCGGCAGCTGTAAAATGCTTGCCGTTGTCACCGACGACCGTACCAACCCCGCCACCGTAGACATCCACAGCTTCTCCGTCGTCGAGCTCGCCAACTTCGTGGACTTAACCCCTTGGCACCGTTTCGGATTCACGGCGGCTAACTCGGCCATTCTGGAAGTTACCGAGGGATATTCAGTTGTTCACATCGTGGACTTGAGCTCCACGCATTGCATGCAGATTCCCACGCTCATCGACGCTATCGCCACCCGCCACGAGGTCCCTCCTTTAATCAGGCTCACGGTCGCTGGTTCCAATACCGACATCCCGCCAGTGCTTAACCTTTCCTACGGTGAGCTGGGTGCCAAGCTGGTGAGCTTCGCGAGTTCTAAGAACATAATATTGGAATTCAAAGTGATTTCCTCTAGCTATAAAGACGGGTTCGCGGCTCTGATCGAACACCTTCGGGTGCAACAGATGGTTTTGGCTGCAGAAGGGCACAGAAGGGAAGCCCTGGTGATAAACTGTCACATGATGCTCCATTATATCCCCGACGAAACCCTATCCACACTAACCCCCGAACCGGACCACTTGATTTCAACCTCTTACATGTACGAGTCGTCGTCGTTGCGTTCGATGTTTCTGAGAGAGGTGCGGAGCTTGGAGCCGACGATCGTGGTTTTAGTGGAGGAAGACGCGGACTTGACATCGAACAATCTGGTGTGCAGGCTGAAGTCGGCGTTTAATTACCTGTGGATACCGTACGACACGGTGGACACGTTCTTGCCTCGAGGGAGCAGGCAGAGGCAGTGGTACGAGGCGGATATAAGCTGGAAGATAGAGAACGTGATAGCGCAGGAAGGAGTACAGAGGGTGGAGAGAGCGGAGCCGAAGAGCAGGTGGGAGCAGCGGATGAGGAACGCCAAGTTTCAAGGGGTCGGATTGAGTGAGGAGGGGGTTTCAGAAGTGAAGGCGATGCTTGACGAGCATGCAGCTGGGTGGGGATTGAAGAAGGACGACGACCATCTTGTTCTCACCTGGAAAGGACACAATGTTGTTTTTGCCTCTTTTTGGATGCCTGCTTGA 1389 0.5436 MSTQFTPSPPSLHQIAAPFSGLSMNKNNQILKTRPWPGFPSSKAFNSFGDATCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVTDDRTNPATVDIHSFSVVELANFVDLTPWHRFGFTAANSAILEVTEGYSVVHIVDLSSTHCMQIPTLIDAIATRHEVPPLIRLTVAGSNTDIPPVLNLSYGELGAKLVSFASSKNIILEFKVISSSYKDGFAALIEHLRVQQMVLAAEGHRREALVINCHMMLHYIPDETLSTLTPEPDHLISTSYMYESSSLRSMFLREVRSLEPTIVVLVEEDADLTSNNLVCRLKSAFNYLWIPYDTVDTFLPRGSRQRQWYEADISWKIENVIAQEGVQRVERAEPKSRWEQRMRNAKFQGVGLSEEGVSEVKAMLDEHAAGWGLKKDDDHLVLTWKGHNVVFASFWMPA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0578 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 54 448 IPR005202 -
Prci10g0578 462 Pfam GRAS domain family 54 459 IPR005202 -
Prci10g0578 462 ProSiteProfiles GRAS family profile. 45 460 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0578 Prci-Chr10 3789649 3791417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0578 24 461 GRAS Transcription Factor Family AT3G49950 58.050 8.38e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci10g0578 GRAS 7.8e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0578 - - adu:107487668 659.833