Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0560 ATGTTCCTGTGTCCAATTTGTAGAGTTCAGGGTTTCAGTAGCAACTCAGAGTCAGCTGGGACCGATTTCGCGGCGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCGTTTGCTGAGATCAAAGCGTCTTTTCGCAGATTGGCCAAGGAAACTCACCCTGACCTTGCTGAATCAAATAATGATTCATCTGCGTCGCGACGATTTGTGCAAATCCTGGCCGCCTACGAGATTCTATCAGACTCCAAGAAGAGAGCTCATTATGACAGATACCTATTGTCTAAAAAAAAGCTTGTGGTGAAGCATACTAGGCAGGGTTCAAAATTGCACTTCTATAGATCACATGAAACAACATCCAAGGAGATGGAAGTTGTTGAGTGGCTAAAGTGGTACAGAGTAGCTATAAATGATATTTTGTCAGACAAGAGGGTAGTAGCTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCAATACATGCGGCTTACTTTGGCCCTCAAATTGAGTCAATGGAACTTCTCCCTGAGTGCTTTGAGGCTGAGGAAAGGTCCTCTTGTGAAACACCAGAGGTTTTGCACTTAGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAACAAGAATCCAGAGATATCTTCCACTAATAATGAGAAGTTAACTTCTTTCAGATCCTTCTATCCTGGCCTATGTCAATCTGTAAAGGATGCAAACATCCACCTGAGTGCAGAAGTTCCACATGACTTTGGAATTCCACAAATTCATGACTCTAAAATATCAAGTCATGTATCAGATGCATACAGAGATCTAGAATTGCATGTCTCTGGAAGGGTGGTTGCTGTGGCCTCCAGGGTCCGTCCTGGCAGCTATTCTGACGCTGAAGTAGCAGAAGATCGCATTCATGTTTATCTTAATTCAGATGAATACACCAAGCATACTAACAGCTGTGATTCTAAAAGTTACTTCACAAGTAGTTCAGCTGTTGGACGAATTCATATAGGAACCATAGCTGGGCTTGGGACGAGTTCAGATGAAAGTTGCTGTGATGTCTATGACAATATAGGGGCCAAGACTCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCATATGCACTGGTATCAAGTTGGAGAAAAAGTTTCCATTTGTGAGTGTAGATGCACTAGAGCGAAGTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGAATGCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGGAAGGCCGAATAGTCACATCACAAAGGCTATGGGATGGCTGGGATGATGGTCATCATTTTGAGAGGAGACTTCATCCAGCAATGTATCTACTTGCTCTTGCATATAGGACACTTGATCTAGAAAATGCCAAAGTAAGAAAACAAACATTTAGGAAAGCTGTAGAAGGACAACTGTTTAGAATCCTTCATTGGTGCAAGAGACTTGTTTAA 1494 0.425 MFLCPICRVQGFSSNSESAGTDFAAENAYELLGVSQTSSFAEIKASFRRLAKETHPDLAESNNDSSASRRFVQILAAYEILSDSKKRAHYDRYLLSKKKLVVKHTRQGSKLHFYRSHETTSKEMEVVEWLKWYRVAINDILSDKRVVAGTGYFDVLERDFYSAIHAAYFGPQIESMELLPECFEAEERSSCETPEVLHLVSGRDLFGMVCLANKNPEISSTNNEKLTSFRSFYPGLCQSVKDANIHLSAEVPHDFGIPQIHDSKISSHVSDAYRDLELHVSGRVVAVASRVRPGSYSDAEVAEDRIHVYLNSDEYTKHTNSCDSKSYFTSSSAVGRIHIGTIAGLGTSSDESCCDVYDNIGAKTHVIMKHRTLLVKHMHWYQVGEKVSICECRCTRAKLPPSKFWLFEPRCGMHDIGGWYVETYGKDKEGRIVTSQRLWDGWDDGHHFERRLHPAMYLLALAYRTLDLENAKVRKQTFRKAVEGQLFRILHWCKRLV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0560 497 SUPERFAMILY Chaperone J-domain 26 96 IPR036869 -
Prci10g0560 497 SMART dnaj_3 26 86 IPR001623 -
Prci10g0560 497 Gene3D DnaJ domain 16 115 IPR036869 -
Prci10g0560 497 ProSiteProfiles dnaJ domain profile. 27 94 IPR001623 -
Prci10g0560 497 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 496 - -
Prci10g0560 497 PRINTS DnaJ domain signature 29 47 IPR001623 -
Prci10g0560 497 PRINTS DnaJ domain signature 66 86 IPR001623 -
Prci10g0560 497 PRINTS DnaJ domain signature 47 62 IPR001623 -
Prci10g0560 497 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Prci10g0560 497 CDD DnaJ 27 83 IPR001623 -
Prci10g0560 497 Pfam DnaJ domain 27 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0560 Prci-Chr10 3697527 3703538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0560 29 91 C2H2 Transcription Factor Family AT1G74250 46.970 7.59e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0560 - - gmx:100805332 725.317