Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0556 ATGCTGGAATTCTGCCGAAGGCCACTAGAGACATGCTTTGGTGGAGGAGGCAACGACGAGCTTCTCTGGCATAAGGACTTGAAACCCCACGCTTTAGGCGACTATTCAATTGCTATAGTTCAAGCTAACTCGTTTCTGGAAGACCAAGGTCAAGTGCTTACCTCTCCTTCTGCAACTTATGTCGGGATATATGACGGACACGGCGGGCCTGAAGCTTCCCGTTTTATCACCAGCCATCTCTTCGCCTTTCTCCAAAAGTTTACTTCTGAAGAAGGTGGGTTATCGGAGGACGTGATAAAGAAAGCCGTTAATGCAACGGAAGAGGGATTCTTACAGCTGGTGAAGCAATCATGGACTAGTCAGCCACAGATTGCTTCGGTGGGTTCATGTTGTCTTGTGGGGGTGATTTCAAACGACGTTCTTTATGTTGCCAACGTTGGGGATTCTAGGGCAGTTCTGGGAAGGAAAGTTAATTGTTCTGTCGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGCAGTGGAAGATGTTAGAAAGGAAGTTATGGCACTTCACCCCGATGATGCGCACATTGTGGTTTACGTTCAGGGAGTTTGGAGAATCAAGGGCATTATTCAGGTGTCAAGATCAATTGGAGATGTTTATCTAAAGAGACCTGAGTTTAATAGGGATCCTCTGTTCCAACAATTTGGATACCTTGTGCCTTTAAAGAGACCTGTAATGACAGCTGAACCATCAATATTGACCCGAAAATTGAAGCCAGACGACATGTTCTTGATATTTGCATCTGACGGGCTTTGGGAGTATTTGACCGATGAAGCTGCGGTTGACATCATCTTCAAAAGTCCAAGACTGGGAATAGCGAAGCGATTGGTGAGAGCTGCACTGGAAGAGGCTGCAAAGAAAAAGGGAATGAGATATAAGGATTTAACTAGAGTTGAGAAAGGTGCTAGGCGCCAATTTCATGATGATATTACAGTGATCGTCGTATACTTGGATCACTCACAGGACTCTCTGAGTGGGATGTCGAAACGTCATGGTGTCTGTGACAGCACTAGTGCTCCTGTTGATATCTTCTCTCTAAATGCGGAAGAAGATGATCTCCAAGTTGAATGA 1116 0.4534 MLEFCRRPLETCFGGGGNDELLWHKDLKPHALGDYSIAIVQANSFLEDQGQVLTSPSATYVGIYDGHGGPEASRFITSHLFAFLQKFTSEEGGLSEDVIKKAVNATEEGFLQLVKQSWTSQPQIASVGSCCLVGVISNDVLYVANVGDSRAVLGRKVNCSVVAERLSTDHNVAVEDVRKEVMALHPDDAHIVVYVQGVWRIKGIIQVSRSIGDVYLKRPEFNRDPLFQQFGYLVPLKRPVMTAEPSILTRKLKPDDMFLIFASDGLWEYLTDEAAVDIIFKSPRLGIAKRLVRAALEEAAKKKGMRYKDLTRVEKGARRQFHDDITVIVVYLDHSQDSLSGMSKRHGVCDSTSAPVDIFSLNAEEDDLQVE 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0556 371 ProSiteProfiles PPM-type phosphatase domain profile. 34 332 IPR001932 -
Prci10g0556 371 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Prci10g0556 371 PANTHER PROTEIN PHOSPHATASE 35 331 IPR015655 GO:0004722|GO:0006470
Prci10g0556 371 SMART PP2C_4 24 330 IPR001932 -
Prci10g0556 371 FunFam Probable protein phosphatase 2C 42 25 340 - -
Prci10g0556 371 Gene3D - 23 339 IPR036457 -
Prci10g0556 371 CDD PP2Cc 41 332 IPR001932 -
Prci10g0556 371 SUPERFAMILY PP2C-like 41 334 IPR036457 -
Prci10g0556 371 Pfam Protein phosphatase 2C 55 302 IPR001932 -
Prci10g0556 371 SMART PP2C_SIG_2 37 332 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0556 Prci-Chr10 3656942 3660216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0556 16 338 PP2C-type Phosphatase Gene Family AT3G51370 56.156 5.51e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0556 - K01102 jre:109013874 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0556 10 3656942 3660216 Prci10g0556 10 3656942 3660216 ECH