Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0550 ATGGATCTCAAGTTCTTATTGGAGAGAGAAAGCGCAATGACTTTTCACAGGGAAGAGGAGGCAGATGAGAAATTCACCCACAAACAACATGTAGATGGAGGGTCAAAGACAAAGGGCAGTTTCGTTAGTGTGGCTGAAGAGGATAATGTTGGAGAACGGTTGAGTTTAGGAGTTGAGAGAAACATGCCTGAGGAGGTTGATCGAATTCAAAACCCAAATCCCCAATCAAAACGTCTCAAGAATAAGTTGTTCTCGTGCAATTTCTGCATGAGGAAGTTTTATAGTTCACAAGCCTTAGGTGGTCACCAGAATGCGCACAGGAGAGAAAGAGGAGCAACCAGAAGGGACCAATCTCAAAAGATGACGACGACGACGACGACGAGCACTTCTCGGGCAGCTAAGTCTTTGGGTGTTCATGCCCATTCGCTTATGCACAAGCCAACCAGGGAAGGGTCTTCTTTGGCTGCTCCATCTGGGGTTGCTAATTCTGGGCTTGATATGGCATGGTCATCTCTTGTGATAGAACAAGCCATGAATTTGATTTGGCCAGGAAGCTTTAGGATTGATTTACCAAAGAGACCATCGGATGGAAATGAACTTGACTTAGATCTTAGGCTATGA 621 0.4525 MDLKFLLERESAMTFHREEEADEKFTHKQHVDGGSKTKGSFVSVAEEDNVGERLSLGVERNMPEEVDRIQNPNPQSKRLKNKLFSCNFCMRKFYSSQALGGHQNAHRRERGATRRDQSQKMTTTTTTSTSRAAKSLGVHAHSLMHKPTREGSSLAAPSGVANSGLDMAWSSLVIEQAMNLIWPGSFRIDLPKRPSDGNELDLDLRL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0550 206 MobiDBLite consensus disorder prediction 19 39 - -
Prci10g0550 206 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Prci10g0550 206 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Prci10g0550 206 MobiDBLite consensus disorder prediction 19 34 - -
Prci10g0550 206 PANTHER ZINC FINGER PROTEIN 4-LIKE 13 206 - -
Prci10g0550 206 MobiDBLite consensus disorder prediction 99 133 - -
Prci10g0550 206 Gene3D Classic Zinc Finger 64 141 - -
Prci10g0550 206 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Prci10g0550 206 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0550 Prci-Chr10 3602783 3603554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0550 82 155 C2H2 Transcription Factor Family AT1G80730 42.000 1.15e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0550 - - pcin:129321428 407.912