Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0528 ATGGAAGCGGTCCCAAGTTTAATGCCGTCGACCCAATTTCAGTCACTTGTATTGTACCAGGGTGCCAAGAGTATTGGATTCTCCAAATCCTTTCTCATCCAACGCTCCCTCTCTTACTATTCCATTTTTGGCAGCCGCTTTGCTTCTCGCAAACTTCTCGGGCTTCACCGCCGCCCTCTGCCTTGTGTCGCTGAATCCAGCACTGATCACCACCCCCACAGCGATCGAAGCCAGCACGATCATCACGGTCATCGCCACCAACACAGCGATCAAACTCACCACGACCATCACGGCTGTCACCACCACTCACACGGCAACAATTGTGCGAATCTTACTGGACCTCAAAAAGCTATTCTCGGGTTCGCCAAAGTCACCAGATGGATAGACTTGGCAGATTTTTTAAGGGAGCATTTGCAATTATGCTGCTTTTCAGCGGCTTTATTCGTGGCTGCTGCCATTTGCCCCCATACCTTGCCTAAGCCCGTCATCAAGCCTGTTCAAAATGCTCTCATTTTCATTGCTTTTCCTTTAGTTGGGGTTCCTGCATCACTAGATGCTCTTGTTGAAATTGGCAGTGGAAAAGTAAATATCCACGTGCTGATGGCTCTGGCAGCCTTTGCGTCCATATTCATGGGAAATTCTTTGGAGGGAGGATTACTTCTAGCCATGTTTAATCTGGCTCACATAGCTGAGGAGTACTTCACCAGCCGTTCTATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGCCCTTGTGCTGGAAACTGACAGTGATGATAAACTTCCCAATACCTTTGACTTGGCATACAAGAGGGTTCCTGTGCATGATGTGACAGTAGGCTCATTTATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACAATTACCATTGAGCATCTGACTGGAGAAGTCAAACCTTTGGAGGCTAGAGTTGGAGACAGAGTTCCTGGAGGTGCGAGGAATTTAGATGGGAGAATAATTATAAAGGCATCAAAGACTTGGAAGGAATCAACACTTAACAGGATTGTGCAGTTGACTGAAGAAGCACAATTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAGCAATACAGCAAAGTTGTTGTGGTGTTATCCGTTGCTATTGCTGTCATTGGGCCACTTATATTCAAGTGGCCATTTATTAGTACCTCAGCTTGCAGGGGTTCAATTTATAGAGCCCTGGGCCTCATGGTGGCTGCATCTCCATGTGCCTTGGCCGTAGCTCCATTGGCATATGCTACAGCAATCAGCTCCTGCGCAAAAAAGGGGATATTGCTAAAAGGTGGACATGTTCTGGATGCACTATCTTCTTGCCGTACAATTGCATTTGACAAAACAGGGACACTGACAACTGGTGGCCTTGTATTTAAGGCAATTGAACCAATTTATGGTCATATGGTTAGAAATAACATAACAAAAATTTCTTCCTGTTGTATTCCTAGCTGTGAAAAAGAAGCTCTAGCTGTTGCCGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTTGATCACAGTGAGGGGAAAGACCTCCCGTCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGACTTGTTGCCACTCTCAACAGCATTGAGTCAGAAAGTGGAGGAGCCAAACTCTTGAAAGCCTCACTTGGATCTGTAGATTTCATCACCTCATTATGTCAATCAGAAGACGAGTCTAAAAGGATCAAGGAAGCAGTTAATGCATCTTCTTTTGGAAGTGAATTTGTTCATGCTGCCCTCTCAATTGACAAAAAGGTAACACTGATTCACTTAGAGGACAGACCTCGATCTGGGGTTTCTAATGTCATAAAGGAGTTGCAAGATGAAGCAAACTTCCGCGTGATGATGTTAACTGGTGACCATGAGTCCAGCGCAAGGAGAGTTGCAAGTTCTGTCGGCATCAATGAGGTTTATTGCAACCTGAAGCCTGAAGATAAGTTGAGTCATGTGAAGGACATCTCGAGGGATATGGGGGGAGGCCTAATCATGGTTGGCGAGGGGATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGAATTGTCCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCATTTTGTATTGCGAAGTCTCGCCAAACAACTTCACTGATTAAACAAAACGTGGCTCTGGCATTGTCCAGCATTTTCATGGCGTCTCTTCCGTCGGTCTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTGTTACATGAAGGTGGAACCCTGCTTGTTTGTCTGAATTCCGTACGAGGTTTGCATGAACCAGCTTGGTCGTGGAGGCAGGATATGCTGCATTTGATAAAGAAGATAAAATCTAGACTTCTTTCACTCACGACAAACAACACTAACCCGAGCACCTTGGACGCCGCAAATTTGTGA 2517 0.4565 MEAVPSLMPSTQFQSLVLYQGAKSIGFSKSFLIQRSLSYYSIFGSRFASRKLLGLHRRPLPCVAESSTDHHPHSDRSQHDHHGHRHQHSDQTHHDHHGCHHHSHGNNCANLTGPQKAILGFAKVTRWIDLADFLREHLQLCCFSAALFVAAAICPHTLPKPVIKPVQNALIFIAFPLVGVPASLDALVEIGSGKVNIHVLMALAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPDFALVLETDSDDKLPNTFDLAYKRVPVHDVTVGSFILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEARVGDRVPGGARNLDGRIIIKASKTWKESTLNRIVQLTEEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCRTIAFDKTGTLTTGGLVFKAIEPIYGHMVRNNITKISSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLVATLNSIESESGGAKLLKASLGSVDFITSLCQSEDESKRIKEAVNASSFGSEFVHAALSIDKKVTLIHLEDRPRSGVSNVIKELQDEANFRVMMLTGDHESSARRVASSVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRGLHEPAWSWRQDMLHLIKKIKSRLLSLTTNNTNPSTLDAANL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0528 838 Gene3D - 457 745 IPR023214 -
Prci10g0528 838 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Prci10g0528 838 MobiDBLite consensus disorder prediction 64 104 - -
Prci10g0528 838 Pfam E1-E2 ATPase 272 444 - -
Prci10g0528 838 MobiDBLite consensus disorder prediction 77 103 - -
Prci10g0528 838 SFLD Haloacid Dehalogenase 446 747 - -
Prci10g0528 838 NCBIfam HAD-IC family P-type ATPase 272 496 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci10g0528 838 NCBIfam HAD-IC family P-type ATPase 598 774 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci10g0528 838 SFLD p-type atpase 446 747 IPR044492 -
Prci10g0528 838 SUPERFAMILY Calcium ATPase, transmembrane domain M 199 768 IPR023298 -
Prci10g0528 838 CDD P-type_ATPase_HM 140 796 - -
Prci10g0528 838 Gene3D - 475 625 IPR023299 GO:0000166
Prci10g0528 838 Pfam haloacid dehalogenase-like hydrolase 461 707 - -
Prci10g0528 838 PRINTS P-type cation-transporting ATPase superfamily signature 640 650 - -
Prci10g0528 838 PRINTS P-type cation-transporting ATPase superfamily signature 718 730 - -
Prci10g0528 838 PRINTS P-type cation-transporting ATPase superfamily signature 617 628 - -
Prci10g0528 838 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Prci10g0528 838 PRINTS P-type cation-transporting ATPase superfamily signature 694 713 - -
Prci10g0528 838 Gene3D - 236 362 - -
Prci10g0528 838 NCBIfam heavy metal translocating P-type ATPase 197 796 IPR027256 GO:0006812|GO:0016020|GO:0019829
Prci10g0528 838 SUPERFAMILY Calcium ATPase, transduction domain A 272 357 IPR008250 -
Prci10g0528 838 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 57 835 - -
Prci10g0528 838 SUPERFAMILY HAD-like 462 794 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0528 Prci-Chr10 3488362 3498365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0528 114 819 Primary Pumps ATPases AT4G37270 76.346 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0528 K01534 - gmx:100776309 1268.06