Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0518 ATGGCCGTGGAGCTCATGATGGGCTACAGGAACGATAGCTTCGCGGCCAAGATGGATGATAATGTTGTTCAAGAAGCTGCGTCTGGCCTGGAGAGCGTGGAGAAGCTCATCAGGCTGCTTTCCCAGAGTCAGCAGCAATTCCAGTCTTCTTCTTCTTCCGCTTCCAAGTCTTCCGTGGAAATCGAGATGGACTGTAAAGCCGTCGCAGACGTCGCCGTTTCCAAGTTCAAGAAGGTGATTTCTCTTCTGGGTCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTTTGCTTCCTCCTCCTCCTCCTCCTACCGTCAATCAAAACCCCGAGCCACAACCCTCGGAACCCAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCGCCGGCCCTTCTTCAACACCAAACTCTCGGCGAGCAACATCCCCTGATCCCCAAAAATGGGATGATTGAGAGGAAGGACTCGTTTAAGACCATTAATTTCTCGTACTCCTCCGCCGCGACGTCATTTATGTCGTCCCTCACTGGCGATACTGATAGTAAACATCCATCGTCGTCGCCGCCGGCGACCGCTTTTCAGATCACAAATCTGTCTCAGGTCTCCTCAGCGGGAAAACCTCCCCTTTCTTCTTCTTCGTTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTTCTAAAAAGAGCAGAAAAATGAGGCTAAAGAGGGTGGTGAGGGTGCCAGCAATAAGCTTGAAGATGGCTGATATCCCACCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGCGTTAGAGGATGTCCGGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTATGAAGGCGATCATAATCACTCGCTCTCTGCGGCCGATTCAACGAATCTCATACTGGAATCCTCTTAG 1014 0.5099 MAVELMMGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQSQQQFQSSSSSASKSSVEIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLLPPPPPPTVNQNPEPQPSEPKVYYATPLQQIPPALLQHQTLGEQHPLIPKNGMIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSPPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSAADSTNLILESS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0518 337 Pfam Plant zinc cluster domain 216 262 IPR018872 -
Prci10g0518 337 Pfam WRKY DNA -binding domain 266 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0518 337 ProSiteProfiles WRKY domain profile. 259 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0518 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 330 IPR044810 GO:0003700
Prci10g0518 337 FunFam WRKY transcription factor 65 248 325 - -
Prci10g0518 337 Gene3D WRKY domain 251 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g0518 337 MobiDBLite consensus disorder prediction 96 112 - -
Prci10g0518 337 MobiDBLite consensus disorder prediction 199 235 - -
Prci10g0518 337 SUPERFAMILY WRKY DNA-binding domain 261 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g0518 337 SMART WRKY_cls 264 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0518 337 MobiDBLite consensus disorder prediction 91 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0518 Prci-Chr10 3410605 3412474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0518 17 325 WRKY Transcription Factor Family AT2G24570 46.273 8.04e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g0518 WRKY 7.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0518 - - qsa:O6P43_033850 464.536