Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0517 ATGGCCGTGGAGCTCATGATGGGCTACAGGAACGATAGCTTCGCGGCCAAGATGGATGATAATGTTGTTCAAGAAGCTGCGTCTGGCCTGGAGAGCGTGGAGAAGCTCATCAGGCTGCTTTCCCAGAGTCAGCAGCAATTCCAGTCTTCTTCTTCTTCCGCTTCCAAGTCTTCCGTGGAAATCGAGATGGACTGTAAAGCCGTCGCAGACGTCGCCGTTTCCAAGTTCAAGAAGGTGATTTCTCTTCTGGGTCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTTTGCTTCCTCCTCCTCCTCCTCCTACCGTCAATCAAAACCCCGAGCCACAACCCTCGGAACCCAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCGCCGGCCCTTCTTCAACACCAAACTCTCGGCGAGCAACATCCCCTGATCCCCAAAAATGGGATGATTGAGAGGAAGGACTCGTTTAAGACCATTAATTTCTCGTACTCCTCCGCCGCGACGTCATTTATGTCGTCCCTCACTGGCGATACTGATAGTAAACATCCATCGTCGTCGCCGCCGGCGACCGCTTTTCAGATCACAAATCTGTCTCAGGTCTCCTCAGCGGGAAAACCTCCCCTTTCTTCTTCTTCGTTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTTCTAAAAAGAGAAAAATGAGGCTAAAGAGGGTGGTGAGGGTGCCAGCAATAAGCTTGAAGATGGCTGATATCCCACCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGCGTTAGAGGATGTCCGGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTATGAAGGCGATCATAATCACTCGCTCTCTGCGGCCGATTCAACGAATCTCATACTGGAATCCTCTTAG 1011 0.5094 MAVELMMGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQSQQQFQSSSSSASKSSVEIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLLPPPPPPTVNQNPEPQPSEPKVYYATPLQQIPPALLQHQTLGEQHPLIPKNGMIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSPPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSAADSTNLILESS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0517 336 Pfam Plant zinc cluster domain 216 261 IPR018872 -
Prci10g0517 336 Gene3D WRKY domain 250 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci10g0517 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 329 IPR044810 GO:0003700
Prci10g0517 336 FunFam WRKY transcription factor 65 247 324 - -
Prci10g0517 336 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0517 336 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0517 336 MobiDBLite consensus disorder prediction 96 112 - -
Prci10g0517 336 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci10g0517 336 MobiDBLite consensus disorder prediction 199 234 - -
Prci10g0517 336 MobiDBLite consensus disorder prediction 91 119 - -
Prci10g0517 336 SUPERFAMILY WRKY DNA-binding domain 260 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0517 Prci-Chr10 3410605 3412474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0517 17 324 WRKY Transcription Factor Family AT2G24570 45.794 3.39e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci10g0517 WRKY 7.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0517 - - qsa:O6P43_033850 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0517 10 3410605 3412474 Prci10g0517 10 3410605 3412474 ECH