Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0513 ATGCCTTCCTCCCCACACCCTTGCTTGTCCTCTTCTCCTTCCTCTGCCTTCTATCTCCCTCTTCCAGCGCCGCCTCCTCCACCCAACTTGCTCCTCCCTTCCGACGCCGTTTCCCTCCTCTCCTTCAAATCCAAAGCCGACCGGGACAACAAGCTCCTCTACGCCCTCAACGAGCGCTACGACTACTGTCAGTGGCAGGGCGTCAAGTGTGCCCATGGCAGAGTCGTTCGCTTCGTCCTCCAGAACTTCGGCCTCCGTGGCTTCTTCCCTCCTGACACCTTGTCTCGTCTCGACCAGCTCCGTGTCCTCAGTCTCCGCAACAACTCCCTCTCTGGTCCTCTCCCCGACCTCTCCTCTCTCCTCAATCTCAAATCCCTCTTCCTCGACCATAACTCTTTCTCTGGTTCTTTCCCTCCTTCCCTTCTCTTCCTCCACCGCCTCCTCACTCTCTCCCTCTCCCACAACAACCTCTCCGGCTCCATCCCCCCTGGTTTGACTCTCCTCGACCGCTTAGTTTCTCTTCGCCTCGATTCCAACTTCTTCAACGGAACCCTTCCCCCCTTCAACCAGTCCTCGCTCCGTATCTTCAATGTATCCGCCAACAATTTCACTGGGCCTGTTCCCATGACTCCCACCCTCCTTCGATTTGGCCCGGCCTCGTTTTCCGGGAACCCGGGTCTCTGCGGGGAGATCGTTCACAACCCATGCAATTCTCGCTCCCCGTTCTTCGGTCCCCCCAATGCCTCCACCTCCGCGTCGCCGCTCGGGCAAAGCGCGGAATCGCAGGGAATCGTGGTCGTTCCTTCGCAGTCATCTACTAGAAAGAAGCATAAGGACACTGCGTTGATTCTGGGATTTACCATTGCCTTCTCGGTCCTCATTGCGTCCATCCTGTTCGCAATTGCATTGTTTAGGAAAAGGAGCAGTTCCAGAAGACCAGACAGCCCAGAAAGTCAAGAGTCTTTGGAAACCAAAGATGTACGTGCTCCTCCTCCCGCATCTTTAGTTGTCGAAACAGAAATAGAGCAAAATAGGGAAGGGAGTGAGAAGGCTAATAAAATAGAGAAGATAAAAGAAGCACATAAGAGTGGGAATTTGGTGTTCTGCTGTGGGGAGCCGCAGCTGTGTACAATTGACCAGTTGATGAGAGCTTCGGCGGAGTTGCTCGGTAGGGGTAATGTGGGAACAACGTACAAGGCGGTGTTGGATGGTCAGCTCATAATGACCGTAAAGAGGCTGGATGCTGTTAAAACAGCAATAACGAGCAGTCAAGACTTCGAGCATCACATGGAAATGGTGGGCGAGCTTCGGCATCCGAATTTGGTGCCCGTTAGAGCTTATTTCCAGGCAAAGGGCGAGAGGCTGGTCATCTATGATTATCAACCTAATGGCAGCCTCTTTAACCTCATACACGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACGTCATGTTTAAAGATAGCTGAAGATGTAGCCCATGGTCTCGCCTACATACATCAAGCCTCGAGATTAATCCATGGCAATCTGAAGTCGACTAATGTCCTTCTTGGCGTGGACTTTGAAGCTTGTGTCACAGACTATGGTTTGGCCCTCCTTGCGGATTTTTCATCGACTGAAGACCCTGACTCTGCAGCTTATAAAGCAGAGACTCGCAACTCTAGCCACCGAGCCACTCCCAAGTCCGATGTATATGCCTTTGGGGTGCTTCTATTAGAGCTTCTTACGGGTAAACCCCCTTCTCAACATCCTTTCCTTGTGCCAGCGGATATGCAGCATTGGGTTAGAGCAATGAGGGATAACGATGGTGCCGAACATAATGGGCTTGGAATGCTCACAGAGGTCGCTAGCATCTGCAGTGGAACGTCGCCTGAGCAGAGGCCTGCAATGTGGCAAGTGTTGAAGATGATACAGGAGATAAAGGACCGTGTAACGATGGAGGATACAAACTGCTAG 1959 0.5242 MPSSPHPCLSSSPSSAFYLPLPAPPPPPNLLLPSDAVSLLSFKSKADRDNKLLYALNERYDYCQWQGVKCAHGRVVRFVLQNFGLRGFFPPDTLSRLDQLRVLSLRNNSLSGPLPDLSSLLNLKSLFLDHNSFSGSFPPSLLFLHRLLTLSLSHNNLSGSIPPGLTLLDRLVSLRLDSNFFNGTLPPFNQSSLRIFNVSANNFTGPVPMTPTLLRFGPASFSGNPGLCGEIVHNPCNSRSPFFGPPNASTSASPLGQSAESQGIVVVPSQSSTRKKHKDTALILGFTIAFSVLIASILFAIALFRKRSSSRRPDSPESQESLETKDVRAPPPASLVVETEIEQNREGSEKANKIEKIKEAHKSGNLVFCCGEPQLCTIDQLMRASAELLGRGNVGTTYKAVLDGQLIMTVKRLDAVKTAITSSQDFEHHMEMVGELRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGLAYIHQASRLIHGNLKSTNVLLGVDFEACVTDYGLALLADFSSTEDPDSAAYKAXETRNSSHRATPKSDVYAFGVLLLELLTGKPPSQHPFLVPADMQHWVRAMRDNDGAEHNGLGMLTEVASICSGTSPEQRPAMWQVLKMIQEIKDRVTMEDTNC 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0513 653 MobiDBLite consensus disorder prediction 309 324 - -
Prci10g0513 653 SUPERFAMILY L domain-like 33 229 - -
Prci10g0513 653 MobiDBLite consensus disorder prediction 309 333 - -
Prci10g0513 653 Gene3D Ribonuclease Inhibitor 189 239 IPR032675 -
Prci10g0513 653 Gene3D Transferase(Phosphotransferase) domain 1 462 652 - -
Prci10g0513 653 FunFam Leucine-rich repeat receptor-like protein kinase 146 238 - -
Prci10g0513 653 SUPERFAMILY Protein kinase-like (PK-like) 387 639 IPR011009 -
Prci10g0513 653 Gene3D Phosphorylase Kinase; domain 1 351 460 - -
Prci10g0513 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 644 IPR046959 -
Prci10g0513 653 FunFam Probable inactive receptor kinase At5g67200 34 144 - -
Prci10g0513 653 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Prci10g0513 653 Pfam Protein kinase domain 386 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0513 653 ProSiteProfiles Leucine-rich repeat profile. 99 121 IPR001611 GO:0005515
Prci10g0513 653 ProSiteProfiles Protein kinase domain profile. 383 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0513 653 ProSiteProfiles Leucine-rich repeat profile. 146 168 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0513 Prci-Chr10 3390913 3394090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0513 31 652 Receptor kinase-like Gene Family AT3G50230 56.366 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci10g0513 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0513 - - qsa:O6P43_034522 834.328