Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0509 ATGGAAACATCCGAGAATTGTTCTGTGAAGGTTGCTCTGCACATTCGTCCTCTCATTGCCGATGAACGCCATCAAGGCTGTAGAGAGTGTGTTAGCGTTATTCATGGAAAGCCCCAGGTTCAAATAGGTTCACATTCCTTTACATTCGACCATGTTTATGGAAATGGTGGATCTCCTTCGTCTGCTATGTTTGAAGAATGCATTTTTCCTTTGGTTGATGGTTTGTTTCAAGGATACAATGCTACTGTTCTTGCTTATGGTCAGACGGGATCTGGGAAAACTTACACGATGGGAACTGGCTATAGTGACAATTGCCGGGCTGGAATAATTCCTCAAGTTATGGATGCCTTGTTCAGCAAGATTGAGACATTAAAGCATCAAACAGAATATCAGTTGCATGTCTCATTCATTGAGATTCTGAAGGAGGAGGTGAGAGATTTGTTGGATACATCATCCATGGGAAAATCGGAAACCTCTAATGGTCATTCTGGAAAACTAACTGTTCCTGGGAGGTCATCAATACAGATTCGTGAAACATCAAATGGAGTGATAACACTGGCAGGTTCAACTGAAGTTTCTGTTAGTACTTTACAGGAAATGGCTGCTTGCTTGGAGCAGGGTTCATTGAGCAGGGCAACAGGAAGTACAAACATGAACAACCAGTCCAGCCGGTCACATGCCATCTTCACAATTACATTGGAACAGATGCACAAACTCCATGCAGATTCTCCTGGCAGTGACACTTCAGATGAGGATATGGGTGAAGAATATCTTTGTGCAAAGCTCCATTTGGTGGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGATCTGATGGTCTTCGATTAAAAGAGGGTATCCACATTAATAGAGGTCTTCTTGCACTTGGTAATGTCATTAGTGCATTGGGAGATGAAAAAAAGCGAAAAGAGGGTGTGCATGTCCCTTACCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGTATCAGTCCTGCTGACATCAATGCTGAGGAAAGTCTTAATACTCTTAAATATGCAAATCGTGCACGCAATATTCAGAACAAACCTGTTGTAAATAGAGATTTACTATCCAATGAGATGCAGCAACTTCGCCAGCAGTTAAAGTGCTTGCAGGCTGAACTTTGTGCTCGTGGTGGATCTCCTGCTGATGAAGTGCGGCTTCTCAAGGAAAGGGTTACTTGGCTTGAGGCAACAAATGAGGACCTTTGTCGGGAACTTCATGAGTATCGCAGCAGATGTGCAACTGAAACACGAGATGAGGATATTTGTCCTGTGATTGATGGACTTGAGAGTGGCCTTCAGAGCCTATATTCATCTGACCACCAAATGGCTGAAAGCATGTCAGGGGAAAATTCTACAGAATCTGATGAAGCAACAAAAGAGTTGGAGCATACACTGTTGCAAAATACTATGGATAAAGAGATGATGGAGTTAAACAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAACTCTTTGGAGGAGTTGACGTGGAAACACTCACACAGCACTTTGGAAGAAAAATTATGGAACTTGAGGAAGAGAAGAGAAGAGTGCAGAAAGAAAGGGACCATTTGTTAGCTGAGGTAGAAAATCGTTCTGCTAATTCAGATGGACAAACACATAAAAATCAAGATGTTCGTGCCCAAAAATTGAAGTCATTGGAAGCACAAATTTTAGATCTTAAGAAGAAACAAGAAAACCAGGTTCGGCTTTTAAAGCAAAAGGAGAAAAGTGAAGAAGCTGCAAAAAGGCTGCAAGCTGAAATACAATATATTAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCTGAGCAATTTCGACAGTGGAAGGCCTCTCGTGAGAAGGAGTTACTCCAGCTGAAAAAAGAGGGTAGGAGGAGTGAATATGAAAGACATAAACTTGAGGCTCTAAACCACCGCCAAAAAATGGTTCTTCAGAGGAAGACAGAGGAAGCAGCAATGGCTACAAAAAGACTAAAAGAATTGTTGGAAGCCCGCAAATCCTCTCCACGCGACAATTTAGTTAATTCAAATGGACATCTACTGCCTGGGCAGATGAATGAAAAAACTTTCCAGAGGTGGCTTGATCATGAGCTTGAGGTCATGGTTAATGTGCATGAAGTTCGTGCTGAATATGATAAGCAAAATCATGTACAATCTGCACTGGAAGAAGAGCTGGCTTTACTGAAACAAGTAGATCAGTTTCCAGATGGACTAAGTACCCCTAAAGGAAAGAACAGATATTCCAGGTACATGTGTCAAATCTGTTCAGCAGATGTTTTTCCATGCCTGTGTCTATGTGGATGTCTTTCTGTTGGTAATTTTGAGCAATTCAACAAGTCTTTAACTTGCCCTTTTTCCTTGAAAACCCCCCCTGTTAGACTCTTATCCATGTCACCAGATGTAAGAATGGCGAGAATAGCTTCTCTTGAGAACATGCTTGGCATGTCTTCGGTTGCTTTAAATAGCATGGCTTCACAACTTAGTGATGCAGAAGAAAGGGAACGGACATTAAACAATCGTGGACGTTGGAACCAATGTCGGTCAATCAGAGATGCAAAGAACATGCTTCAGTATTTGTTTAATGCAGCAGTGGAATCCAGGTGCCAATTGTGGGAAAAGAATACGGAACTTAAGGACATGAAGGAGCAACTGAATGAGCTTGTAATGCTACTACAGCAAAGTGAAATACAGCGAAAAGAACTTGTGAAGGAGCAAAAAACGAGGGAACAAACTGTTGCCATTGCATTGAGCACATCTGCATCGGCAAATTCGCGATCATTGAAACACTTCGCTGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCTCTGGAATTGTTAATGGGTCAGTCAGGGAGTCAGCTACATTTCTAGATGAAACTCGAAAGATGATACCCATCGGACAGTTATCAACAAAGAAGCTAGCAGCTGTAGGACAAGCTGGAAAACTATGGAGGTGGAAGAGAAGTCATCATCAATGGTTGCTGCAGTTCAAATGGAAATGGCAGAAACCTTGGAAACTCTCAGAATGGATCAAGCACAGTGATGAGACAATCATGCGTTCAAGGCCTCGAGCACTTGCTTCAATTGATGTGATGTCTTAG 3207 0.4228 METSENCSVKVALHIRPLIADERHQGCRECVSVIHGKPQVQIGSHSFTFDHVYGNGGSPSSAMFEECIFPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCRAGIIPQVMDALFSKIETLKHQTEYQLHVSFIEILKEEVRDLLDTSSMGKSETSNGHSGKLTVPGRSSIQIRETSNGVITLAGSTEVSVSTLQEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHADSPGSDTSDEDMGEEYLCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLLSNEMQQLRQQLKCLQAELCARGGSPADEVRLLKERVTWLEATNEDLCRELHEYRSRCATETRDEDICPVIDGLESGLQSLYSSDHQMAESMSGENSTESDEATKELEHTLLQNTMDKEMMELNKRLEQKESEMKLFGGVDVETLTQHFGRKIMELEEEKRRVQKERDHLLAEVENRSANSDGQTHKNQDVRAQKLKSLEAQILDLKKKQENQVRLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRSEYERHKLEALNHRQKMVLQRKTEEAAMATKRLKELLEARKSSPRDNLVNSNGHLLPGQMNEKTFQRWLDHELEVMVNVHEVRAEYDKQNHVQSALEEELALLKQVDQFPDGLSTPKGKNRYSRYMCQICSADVFPCLCLCGCLSVGNFEQFNKSLTCPFSLKTPPVRLLSMSPDVRMARIASLENMLGMSSVALNSMASQLSDAEERERTLNNRGRWNQCRSIRDAKNMLQYLFNAAVESRCQLWEKNTELKDMKEQLNELVMLLQQSEIQRKELVKEQKTREQTVAIALSTSASANSRSLKHFADEMSGPLSPMSLPAPKQLKFTSGIVNGSVRESATFLDETRKMIPIGQLSTKKLAAVGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRALASIDVMS 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0509 1068 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 Coils Coil 845 865 - -
Prci10g0509 1068 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci10g0509 1068 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 Pfam Kinesin motor domain 15 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 396 IPR027417 -
Prci10g0509 1068 Coils Coil 899 929 - -
Prci10g0509 1068 Coils Coil 669 689 - -
Prci10g0509 1068 Coils Coil 571 622 - -
Prci10g0509 1068 Coils Coil 521 548 - -
Prci10g0509 1068 CDD KISc_KIF4 7 366 - -
Prci10g0509 1068 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Prci10g0509 1068 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0509 1068 Coils Coil 373 393 - -
Prci10g0509 1068 Gene3D Kinesin motor domain 1 393 IPR036961 -
Prci10g0509 1068 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1057 IPR027640 GO:0003777|GO:0007018
Prci10g0509 1068 Coils Coil 488 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0509 Prci-Chr10 3378877 3390820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0509 9 417 Calmodulin-binding Proteins AT5G65930 32.930 3.93e-52 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0509 - - pcin:129322836 2101.25