Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0506 ATGGAAACATCCGAGAATTGTTCTGTGAAGGTTGCTCTGCACATTCGTCCTCTCATTGCCGATGAACGCCATCAAGGCTGTAGAGAGTGTGTTAGCGTTATTCATGGAAAGCCCCAGGTTCAAATAGGTTCACATTCCTTTACATTCGACCATGTTTATGGAAATGGTGGATCTCCTTCGTCTGCTATGTTTGAAGAATGCATTTTTCCTTTGGTTGATGGTTTGTTTCAAGGATACAATGCTACTGTTCTTGCTTATGGTCAGACGGGATCTGGGAAAACTTACACGATGGGAACTGGCTATAGTGACAATTGCCGGGCTGGAATAATTCCTCAAGTTATGGATGCCTTGTTCAGCAAGATTGAGACATTAAAGCATCAAACAGAATATCAGTTGCATGTCTCATTCATTGAGATTCTGAAGGAGGAGGTGAGAGATTTGTTGGATACATCATCCATGGGAAAATCGGAAACCTCTAATGGTCATTCTGGAAAACTAACTGTTCCTGGGAGGTCATCAATACAGATTCGTGAAACATCAAATGGAGTGATAACACTGGCAGGTTCAACTGAAGTTTCTGTTAGTACTTTACAGGAAATGGCTGCTTGCTTGGAGCAGGGTTCATTGAGCAGGGCAACAGGAAGTACAAACATGAACAACCAGTCCAGCAGCCGGTCACATGCCATCTTCACAATTACATTGGAACAGATGCACAAACTCCATGCAGATTCTCCTGGCAGTGACACTTCAGATGAGGATATGGGTGAAGAATATCTTTGTGCAAAGCTCCATTTGGTGGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGATCTGATGGTCTTCGATTAAAAGAGGGTATCCACATTAATAGAGGTCTTCTTGCACTTGGTAATGTCATTAGTGCATTGGGAGATGAAAAAAAGCGAAAAGAGGGTGTGCATGTCCCTTACCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGTATCAGTCCTGCTGACATCAATGCTGAGGAAAGTCTTAATACTCTTAAATATGCAAATCGTGCACGCAATATTCAGAACAAACCTGTTGTAAATAGAGATTTACTATCCAATGAGATGCAGCAACTTCGCCAGCAGTTAAAGTGCTTGCAGGCTGAACTTTGTGCTCGTGGTGGATCTCCTGCTGATGAAGTGCGGCTTCTCAAGGAAAGGGTTACTTGGCTTGAGGCAACAAATGAGGACCTTTGTCGGGAACTTCATGAGTATCGCAGCAGATGTGCAACTGAAACACGAGATGAGGATATTTGTCCTGTGATTGATGGACTTGAGAGTGGCCTTCAGAGCCTATATTCATCTGACCACCAAATGGCTGAAAGCATGTCAGGGGAAAATTCTACAGAATCTGATGAAGCAACAAAAGAGTTGGAGCATACACTGTTGCAAAATACTATGGATAAAGAGATGATGGAGTTAAACAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAACTCTTTGGAGGAGTTGACGTGGAAACACTCACACAGCACTTTGGAAGAAAAATTATGGAACTTGAGGAAGAGAAGAGAAGAGTGCAGAAAGAAAGGGACCATTTGTTAGCTGAGGTAGAAAATCGTTCTGCTAATTCAGATGGACAAACACATAAAAATCAAGATGTTCGTGCCCAAAAATTGAAGTCATTGGAAGCACAAATTTTAGATCTTAAGAAGAAACAAGAAAACCAGGTTCGGCTTTTAAAGCAAAAGGAGAAAAGTGAAGAAGCTGCAAAAAGGCTGCAAGCTGAAATACAATATATTAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCTGAGCAATTTCGACAGTGGAAGGCCTCTCGTGAGAAGGAGTTACTCCAGCTGAAAAAAGAGGGTAGGAGGAGTGAATATGAAAGACATAAACTTGAGGCTCTAAACCACCGCCAAAAAATGGTTCTTCAGAGGAAGACAGAGGAAGCAGCAATGGCTACAAAAAGACTAAAAGAATTGTTGGAAGCCCGCAAATCCTCTCCACGCGACAATTTAGTTAATTCAAATGGACATCTACTGCCTGGGCAGATGAATGAAAAAACTTTCCAGAGGTGGCTTGATCATGAGCTTGAGGTCATGGTTAATGTGCATGAAGTTCGTGCTGAATATGATAAGCAAAATCATGTACAATCTGCACTGGAAGAAGAGCTGGCTTTACTGAAACAAGTAGATCAGTTTCCAGATGGACTAAGTACCCCTAAAGGAAAGAACAGATATTCCAGGTACATGTGTCAAATCTGTTCAGCAGATGTTTTTCCATGCCTGTGTCTATGTGGATGTCTTTCTGTTGGTAATTTTGAGCAATTCAACAAGTCTTTAACTTGCCCTTTTTCCTTGAAAACCCCCCCTGTTAGACTCTTATCCATGTCACCAGATGTAAGAATGGCGAGAATAGCTTCTCTTGAGAACATGCTTGGCATGTCTTCGGTTGCTTTAAATAGCATGGCTTCACAACTTAGTGATGCAGAAGAAAGGGAACGGACATTAAACAATCGTGGACGTTGGAACCAATGTCGGTCAATCAGAGATGCAAAGAACATGCTTCAGTATTTGTTTAATGCAGCAGTGGAATCCAGGTGCCAATTGTGGGAAAAGAATACGGAACTTAAGGACATGAAGGAGCAACTGAATGAGCTTGTAATGCTACTACAGCAAAGTGAAATACAGCGAAAAGAACTTGTGAAGGAGCAAAAAACGAGGGAACAAACTGTTGCCATTGCATTGAGCACATCTGCATCGGCAAATTCGCGATCATTGAAACACTTCGCTGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCTCTGGAATTGTTAATGGGTCAGTCAGGGAGTCAGCTACATTTCTAGATGAAACTCGAAAGATGATACCCATCGGACAGTTATCAACAAAGAAGCTAGCAGCTGTAGGACAAGCTGGAAAACTATGGAGGTGGAAGAGAAGTCATCATCAATGGTTGCTGCAGTTCAAATGGAAATGGCAGAAACCTTGGAAACTCTCAGAATGGATCAAGCACAGTGATGAGACAATCATGCGTTCAAGGCCTCGAGCACTTGCTTCAATTGATGTGATGTCTTAG 3210 0.4231 METSENCSVKVALHIRPLIADERHQGCRECVSVIHGKPQVQIGSHSFTFDHVYGNGGSPSSAMFEECIFPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCRAGIIPQVMDALFSKIETLKHQTEYQLHVSFIEILKEEVRDLLDTSSMGKSETSNGHSGKLTVPGRSSIQIRETSNGVITLAGSTEVSVSTLQEMAACLEQGSLSRATGSTNMNNQSSSRSHAIFTITLEQMHKLHADSPGSDTSDEDMGEEYLCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVVNRDLLSNEMQQLRQQLKCLQAELCARGGSPADEVRLLKERVTWLEATNEDLCRELHEYRSRCATETRDEDICPVIDGLESGLQSLYSSDHQMAESMSGENSTESDEATKELEHTLLQNTMDKEMMELNKRLEQKESEMKLFGGVDVETLTQHFGRKIMELEEEKRRVQKERDHLLAEVENRSANSDGQTHKNQDVRAQKLKSLEAQILDLKKKQENQVRLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRSEYERHKLEALNHRQKMVLQRKTEEAAMATKRLKELLEARKSSPRDNLVNSNGHLLPGQMNEKTFQRWLDHELEVMVNVHEVRAEYDKQNHVQSALEEELALLKQVDQFPDGLSTPKGKNRYSRYMCQICSADVFPCLCLCGCLSVGNFEQFNKSLTCPFSLKTPPVRLLSMSPDVRMARIASLENMLGMSSVALNSMASQLSDAEERERTLNNRGRWNQCRSIRDAKNMLQYLFNAAVESRCQLWEKNTELKDMKEQLNELVMLLQQSEIQRKELVKEQKTREQTVAIALSTSASANSRSLKHFADEMSGPLSPMSLPAPKQLKFTSGIVNGSVRESATFLDETRKMIPIGQLSTKKLAAVGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRALASIDVMS 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0506 1069 FunFam kinesin-like protein KIN-4A isoform X1 2 394 - -
Prci10g0506 1069 Coils Coil 522 549 - -
Prci10g0506 1069 MobiDBLite consensus disorder prediction 151 171 - -
Prci10g0506 1069 Coils Coil 374 394 - -
Prci10g0506 1069 PRINTS Kinesin heavy chain signature 262 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 PRINTS Kinesin heavy chain signature 316 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 ProSiteProfiles Kinesin motor domain profile. 8 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 SMART kinesin_4 6 374 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 Pfam Kinesin motor domain 15 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0506 1069 Coils Coil 670 690 - -
Prci10g0506 1069 Coils Coil 900 930 - -
Prci10g0506 1069 Coils Coil 489 509 - -
Prci10g0506 1069 Coils Coil 572 623 - -
Prci10g0506 1069 ProSitePatterns Kinesin motor domain signature. 261 272 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci10g0506 1069 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1058 IPR027640 GO:0003777|GO:0007018
Prci10g0506 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 397 IPR027417 -
Prci10g0506 1069 Coils Coil 846 866 - -
Prci10g0506 1069 CDD KISc_KIF4 7 367 - -
Prci10g0506 1069 Gene3D Kinesin motor domain 1 394 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0506 Prci-Chr10 3378876 3390820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0506 9 418 Calmodulin-binding Proteins AT5G65930 32.850 9.62e-51 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0506 - - pcin:129322836 2107.41