Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0504 ATGGAAACATCCGAGAATTGTTCTGTGAAGGTTGCTCTGCACATTCGTCCTCTCATTGCCGATGAACGCCATCAAGGCTGTAGAGAGTGTGTTAGCGTTATTCATGGAAAGCCCCAGGTTCAAATAGGTTCACATTCCTTTACATTCGACCATGTTTATGGAAATGGTGGATCTCCTTCGTCTGCTATGTTTGAAGAATGCATTTTTCCTTTGGTTGATGGTTTGTTTCAAGGATACAATGCTACTGTTCTTGCTTATGGTCAGACGGGATCTGGGAAAACTTACACGATGGGAACTGGCTATAGTGACAATTGCCGGGCTGGAATAATTCCTCAAGTTATGGATGCCTTGTTCAGCAAGATTGAGACATTAAAGCATCAAACAGAATATCAGTTGCATGTCTCATTCATTGAGATTCTGAAGGAGGAGGTGAGAGATTTGTTGGATACATCATCCATGGGAAAATCGGAAACCTCTAATGGTCATTCTGGAAAACTAACTGTTCCTGGGAGGTCATCAATACAGATTCGTGAAACATCAAATGGAGTGATAACACTGGCAGGTTCAACTGAAGTTTCTGTTAGTACTTTACAGGAAATGGCTGCTTGCTTGGAGCAGGGTTCATTGAGCAGGGCAACAGGAAGTACAAACATGAACAACCAGTCCAGCAGCCGGTCACATGCCATCTTCACAATTACATTGGAACAGATGCACAAACTCCATGCAGATTCTCCTGGCAGTGACACTTCAGATGAGGATATGGGTGAAGAATATCTTTGTGCAAAGCTCCATTTGGTGGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGATCTGATGGTCTTCGATTAAAAGAGGGTATCCACATTAATAGAGGTCTTCTTGCACTTGGTAATGTCATTAGTGCATTGGGAGATGAAAAAAAGCGAAAAGAGGGTGTGCATGTCCCTTACCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCGCATTTTGTTTCAGTTGAGGCAGCATATTGCAGAAAATCTTGTATCAGTCCTGCTGACATCAATGCTGAGGAAAGTCTTAATACTCTTAAATATGCAAATCGTGCACGCAATATTCAGAACAAACCTGTTGTAAATAGAGATTTACTATCCAATGAGATGCAGCAACTTCGCCAGCAGTTAAAGTGCTTGCAGGCTGAACTTTGTGCTCGTGGTGGATCTCCTGCTGATGAAGTGCGGCTTCTCAAGGAAAGGGTTACTTGGCTTGAGGCAACAAATGAGGACCTTTGTCGGGAACTTCATGAGTATCGCAGCAGATGTGCAACTGAAACACGAGATGAGGATATTTGTCCTGTGATTGATGGACTTGAGAGTGGCCTTCAGAGCCTATATTCATCTGACCACCAAATGGCTGAAAGCATGTCAGGGGAAAATTCTACAGAATCTGATGAAGCAACAAAAGAGTTGGAGCATACACTGTTGCAAAATACTATGGATAAAGAGATGATGGAGTTAAACAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAACTCTTTGGAGGAGTTGACGTGGAAACACTCACACAGCACTTTGGAAGAAAAATTATGGAACTTGAGGAAGAGAAGAGAAGAGTGCAGAAAGAAAGGGACCATTTGTTAGCTGAGGTAGAAAATCGTTCTGCTAATTCAGATGGACAAACACATAAAAATCAAGATGTTCGTGCCCAAAAATTGAAGTCATTGGAAGCACAAATTTTAGATCTTAAGAAGAAACAAGAAAACCAGGTTCGGCTTTTAAAGCAAAAGGAGAAAAGTGAAGAAGCTGCAAAAAGGCTGCAAGCTGAAATACAATATATTAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCTGAGCAATTTCGACAGTGGAAGGCCTCTCGTGAGAAGGAGTTACTCCAGCTGAAAAAAGAGGGTAGGAGGAGTGAATATGAAAGACATAAACTTGAGGCTCTAAACCACCGCCAAAAAATGGTTCTTCAGAGGAAGACAGAGGAAGCAGCAATGGCTACAAAAAGACTAAAAGAATTGTTGGAAGCCCGCAAATCCTCTCCACGCGACAATTTAGTTAATTCAAATGGACATCTACTGCCTGGGCAGATGAATGAAAAAACTTTCCAGAGGTGGCTTGATCATGAGCTTGAGGTCATGGTTAATGTGCATGAAGTTCGTGCTGAATATGATAAGCAAAATCATGTACAATCTGCACTGGAAGAAGAGCTGGCTTTACTGAAACAAGTAGATCAGTTTCCAGATGGACTAAGTACCCCTAAAGGAAAGAACAGATATTCCAGGTGCCAATTGTGGGAAAAGAATACGGAACTTAAGGACATGAAGGAGCAACTGAATGAGCTTGTAATGCTACTACAGCAAAGTGAAATACAGCGAAAAGAACTTGTGAAGGAGCAAAAAACGAGGGAACAAACTGTTGCCATTGCATTGAGCACATCTGCATCGGCAAATTCGCGATCATTGAAACACTTCGCTGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCTCTGGAATTGTTAATGGGTCAGTCAGGGAGTCAGCTACATTTCTAGATGAAACTCGAAAGATGATACCCATCGGACAGTTATCAACAAAGAAGCTAGCAGCTGTAGGACAAGCTGGAAAACTATGGAGGTGGAAGAGAAGTCATCATCAATGGTTGCTGCAGTTCAAATGGAAATGGCAGAAACCTTGGAAACTCTCAGAATGGATCAAGCACAGTGATGAGACAATCATGCGTTCAAGGCCTCGAGCACTTGCTTCAATTGATGTGATGTCTTAG 2895 0.4235 METSENCSVKVALHIRPLIADERHQGCRECVSVIHGKPQVQIGSHSFTFDHVYGNGGSPSSAMFEECIFPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCRAGIIPQVMDALFSKIETLKHQTEYQLHVSFIEILKEEVRDLLDTSSMGKSETSNGHSGKLTVPGRSSIQIRETSNGVITLAGSTEVSVSTLQEMAACLEQGSLSRATGSTNMNNQSSSRSHAIFTITLEQMHKLHADSPGSDTSDEDMGEEYLCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIAHFVSVEAAYCRKSCISPADINAEESLNTLKYANRARNIQNKPVVNRDLLSNEMQQLRQQLKCLQAELCARGGSPADEVRLLKERVTWLEATNEDLCRELHEYRSRCATETRDEDICPVIDGLESGLQSLYSSDHQMAESMSGENSTESDEATKELEHTLLQNTMDKEMMELNKRLEQKESEMKLFGGVDVETLTQHFGRKIMELEEEKRRVQKERDHLLAEVENRSANSDGQTHKNQDVRAQKLKSLEAQILDLKKKQENQVRLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRSEYERHKLEALNHRQKMVLQRKTEEAAMATKRLKELLEARKSSPRDNLVNSNGHLLPGQMNEKTFQRWLDHELEVMVNVHEVRAEYDKQNHVQSALEEELALLKQVDQFPDGLSTPKGKNRYSRCQLWEKNTELKDMKEQLNELVMLLQQSEIQRKELVKEQKTREQTVAIALSTSASANSRSLKHFADEMSGPLSPMSLPAPKQLKFTSGIVNGSVRESATFLDETRKMIPIGQLSTKKLAAVGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRALASIDVMS 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0504 964 FunFam kinesin-like protein KIN-4A isoform X1 2 407 - -
Prci10g0504 964 Coils Coil 535 562 - -
Prci10g0504 964 ProSiteProfiles Kinesin motor domain profile. 8 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 CDD KISc_KIF4 7 380 - -
Prci10g0504 964 Coils Coil 387 407 - -
Prci10g0504 964 Pfam Kinesin motor domain 15 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 MobiDBLite consensus disorder prediction 151 171 - -
Prci10g0504 964 Coils Coil 502 522 - -
Prci10g0504 964 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 773 IPR027640 GO:0003777|GO:0007018
Prci10g0504 964 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 PRINTS Kinesin heavy chain signature 316 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 PRINTS Kinesin heavy chain signature 262 280 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 Coils Coil 795 825 - -
Prci10g0504 964 Gene3D Kinesin motor domain 1 407 IPR036961 -
Prci10g0504 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 410 IPR027417 -
Prci10g0504 964 ProSitePatterns Kinesin motor domain signature. 261 272 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci10g0504 964 SMART kinesin_4 6 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci10g0504 964 Coils Coil 683 703 - -
Prci10g0504 964 Coils Coil 585 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0504 Prci-Chr10 3378871 3390820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0504 49 431 Calmodulin-binding Proteins AT5G65930 34.726 3.04e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0504 - - pcin:129322836 1555.42