Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0472 ATGGCAAGCCAGATCCTAATCATCTCAACGAGCAACGTGCAAGCAGCGACTCGAAGCGGTGATCCGACTCGAAAGATCGAGCTAAGTCCGTGGGATCTTCAGCTCCTCCTCGTGGACCCCATTCAGAAAGGACTTCTTTTCCGTAAACCCAGGGCAAACATGAATTCGATAATCCACCACCTGAAAGCCTCTCTTTCATCCACCCTTGATTTCTTCCCGCCCCTCGCCGGCCGTCTCACCGTCGACGAACACGACGACGATACCTCCTCCGTTTCTGTTCTCTGCAACAACTCTGGAGCATTATTTGTCCATGCCGTAGCAGCTGATTTGACGATCTCAGATATCCTTCAGCCCCTCTACACTCCTCGCATCGTCCATTCCTTCTTTCCGCTTAACAGAGTAAGAAACTACGAGGGCACGTGCAAGCCACTGCTAGGCGTTCAAGTCACGGAGCTAAGAGACAGCATTTTCATCGGATGCACTATCAACCACGTCGTCGCCGACGGCACGTCGTTTTGGCACTTCTTCAATTCCTGGTCTGAAATCTCACGTGGCTCGAGGGAGCCATCCAAGCCTCCCACGCTCGAGCGTTGGTTTCTCGATGGCATTGATCGGCGCCCTGTACGCATTCGTCTCCCCAAGGCGAAGGAGAAGCAGAAGTTCGGTGGGTACCTCAATTCGCGGCTGCATCAAGAGAGGGTGTTTCATTTCTCAAAGGAAAAAATAGCGGAACTGAAAGCAAAAGCTAACGCGATGGTATGTTCCAATATGATATCTTCTCTACAAGCACTTTTGACACATCTCTGGCGTTCTATCGTTCGGACCCAGGGTACTGAGCCTGAGGAAGAGGTCATCTACAGATTGCTGATAGGTATAAGGCCGAGGATGCGTCCGCCGATGCCTGAGAACTATTTTGGAAACGCGGTGCAGGATGGTACTGTGAGCATGAGAGCAGGGGAGCTGCTAGCCAGAGAGGGTCTCGGCAAGGCCGCTTTGGAGATGAACAAGATGGTTGCTTTGCACACGGAAGAGAAGCTCGTTAGCCACGTCAAGTCTTGGGTGAAAAACCCTAGGCTGCTCACAGAGGATGGGATGGCTGGGAATGCACTGGTTACGAGTAGTTCGCCAAGGTTTGACGTGTACGGGAATGACTTCGGATGGGGAAAGCCGGTGGCGGTCCGAAGTGGCGCCGGTAATAAAACGTACGGGAAAATTACTGTGTTTGCCGGGGTAGCAGAAGGGAGCATTGATGTGGAAGTTTCCCTTTCTTCTGAAATTTTGGAGGCCATGGGAAAGGACTCTGAGTTCATGGAAGCTGTTTCCGACTTTCCGTTGCATTCTATAATTAATTAA 1353 0.5144 MASQILIISTSNVQAATRSGDPTRKIELSPWDLQLLLVDPIQKGLLFRKPRANMNSIIHHLKASLSSTLDFFPPLAGRLTVDEHDDDTSSVSVLCNNSGALFVHAVAADLTISDILQPLYTPRIVHSFFPLNRVRNYEGTCKPLLGVQVTELRDSIFIGCTINHVVADGTSFWHFFNSWSEISRGSREPSKPPTLERWFLDGIDRRPVRIRLPKAKEKQKFGGYLNSRLHQERVFHFSKEKIAELKAKANAMVCSNMISSLQALLTHLWRSIVRTQGTEPEEEVIYRLLIGIRPRMRPPMPENYFGNAVQDGTVSMRAGELLAREGLGKAALEMNKMVALHTEEKLVSHVKSWVKNPRLLTEDGMAGNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKTYGKITVFAGVAEGSIDVEVSLSSEILEAMGKDSEFMEAVSDFPLHSIIN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0472 450 Pfam Transferase family 7 437 - -
Prci10g0472 450 Gene3D - 6 210 IPR023213 -
Prci10g0472 450 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 438 - -
Prci10g0472 450 Gene3D - 230 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0472 Prci-Chr10 3263838 3265424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0472 61 432 Monolignol Biosynthesis Gene Families AT5G48930 26.683 3.02e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0472 - - qsu:111994143 535.798