Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0471 ATGGCATCAAAGCCTATGGCTGTCGCTTCTGCTAATGTTAGATTTGGGGCTACCAATGACTCCTCGATGGCACAAGGCCCAGGTCCGACTCCTGAGGATGTGTTATCGGTTATTGATTCATTAAAAAAACATATATCTGCTGAGCGGTGTGTTTCCATCAAGAAAAGAATGGAAGACAATAGACAGAAGCTGACTGGCGTCACAAATCATCTTTATAAATCATCAATGGGAAGAAGAATTTGTGGCATTGCCGATACTAATGGAAATCCAGACCTACTGACGAAGAGGCAAAAAGATGCAATCAATATGCGCAATGATATTCATGCAAGTAATGGTGACAAGGAGAGCAACGGTTCCCAGGATTGCAATTTTTCTACAGCAGTCCTTCTAGGATCTAACGTTGCAGTAAAGAATGCTGTTCGCCCTATCAAGCTGCCAGAAGCAAAAAGATTACCTCCTTATACTACGTGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCTGTAGTAGGTCGAAGGAGAATTTATTATGACCAAAACGGTGGAGAGGCACTTATCTGTAGTGACAGCGAAGAGGAAATAATTGAGGAAGAAGAGGAAAAAAGGGATTTTGTGGAATCTGAAGATTATATACTTCGCATGGCAGTCAAAGAATTTGGTTTGTCTGATCTTGTACTGGAGTCTCTGGCTCAGTGTTTCTCTAGAAACACTTGTGAACTTAAGGCAAGATATGAAGTTATTAGTAATGGAGAAAACATTGGTGGGGTTTCTAAGAGTGCTGGTACTGAAGAGAATTCACTAAGTGGAAACTCTTTTCTGGAAAAAGATCTTGAAGCAGCTCTTGATTCTTTTGACAACCTTTTCTGCCGTAGATGTCTTGTTTTCGATTGCAGATTGCATGGATGTTCTCAGGATCTTGTGTTTCCTGCTGAGAAACAACCTGTGTGGATCCCTCCTAATGCTGAAAGTACACCGTGTGGTCCAAATTGTTTTCAATTGGAACTAAAACCACAAAGATTTGCCGGATTGACCTCTTCTTCCCAGGGAGATGCTGAGAAGAAAAGCTCAGGTGGTGCTGGGATGCATATAGCATATAGGAAGAAGTCTTTTGGCCCATCTGCTAGAAGGTGGGTAAAGGGCAGCCAAAGTGAAAGTACTTCATCCAATGCGAAGAACATATCTGAAAGTAGTGACTCAGAGAATGGTAATGGTCCTGGACAGGAAACTGCCTCAGCCTCCCACTCAGCATCTCCTAAAACTAAAACTCTGGGGAAAGGTGGAATAGGTACAAGGAACAGTAAGCGTGCAGCAGAATGTGTCCTAGTTTGTTTGCAGAAAAGGCAGAAGAAAACACTGCTTTCAGATTCTGATTCCATTGGTGAGGCTCCTGATTGTTCATTGAATGGGATAGCTTCTGACCCACCTGTCAGTAGTAGCAATGACATCTTGAGGAAGGAAGAATTCTTTGATGAGAATGTATGCACGCAACAATGTACTGGCAATAAGTTATGGAAACCTCTTGAAAAGGGGCTTTTGGAGAAAGGAGTTGAAATTTTTGGTAGAAACAGCTGTTTAATTTCCAGGAATCTCTTAAATGGTCTAAAGACATGTTGGGAGGTTTTCCAATACATTAATTGCAACCAGGGAAAGGTGTCAGGCTCTACTGGTGATGCTGAAATTTCCCTCATGGAAGGCTATTCCAAGGGTAATAATGAAGTAAGACGAAGATCAAGGTTTTTACGTAGAAGGGGAAGAGTTCGCCGCTTAAAGTACACCTGGAAGTCTGCTGCCTACCATTCAATCAGAAAAAGGATCACAGAGAGAAAGGATCAGCCCTGCCGGCAGTATAATCCATGTGGCTGTCAATCAGCATGCGGAAAGCAGTGCCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAATACTGTGGATGCCCAAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCAAAAAGTCAATGCCGGAGTCGTCAATGTCCATGTTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGAAATTGTTGGGTCAGTTGCGGTGATGGTACCCTAGGGATTCCCAGCCAAAGGGGTGATAATTATGAATGTAGAAATATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCTTTCTTAAAGAGCAGTGTTGGAAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCACATCGGGAAGCAGATAAGCGGGGAAAGATATATGATCGCGAGAATTCATCTTTTCTCTTTAATCTAAATGATCAGTTTGTTCTTGATGCTTATCGAAAGGGTGATAAATTGAAGTTTGCCAACCATTCTCCTGATCCGAATTGTTATGCCAAGGTTATTATGGTTGCTGGAGATCACAGAGTAGGGATTTTTGCCAAGGAAAGGATCAGTGCTGGGGAGGAACTTTTTTATGATTATCGTTATGAGCCAGATAGAGCTCCAGCTTGGGCTCGCAAGCCCGAGGCATCTGGGACCAGGAAAGATGACAGCGCTCCTTCAAGTGGTCGGGCGAAGAAGCTTGCTTAA 2607 0.4285 MASKPMAVASANVRFGATNDSSMAQGPGPTPEDVLSVIDSLKKHISAERCVSIKKRMEDNRQKLTGVTNHLYKSSMGRRICGIADTNGNPDLLTKRQKDAINMRNDIHASNGDKESNGSQDCNFSTAVLLGSNVAVKNAVRPIKLPEAKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEEEEKRDFVESEDYILRMAVKEFGLSDLVLESLAQCFSRNTCELKARYEVISNGENIGGVSKSAGTEENSLSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPVWIPPNAESTPCGPNCFQLELKPQRFAGLTSSSQGDAEKKSSGGAGMHIAYRKKSFGPSARRWVKGSQSESTSSNAKNISESSDSENGNGPGQETASASHSASPKTKTLGKGGIGTRNSKRAAECVLVCLQKRQKKTLLSDSDSIGEAPDCSLNGIASDPPVSSSNDILRKEEFFDENVCTQQCTGNKLWKPLEKGLLEKGVEIFGRNSCLISRNLLNGLKTCWEVFQYINCNQGKVSGSTGDAEISLMEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKSSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGTRKDDSAPSSGRAKKLA 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0471 868 SMART set_7 719 840 IPR001214 GO:0005515
Prci10g0471 868 FunFam Putative histone-lysine N-methyltransferase EZH2 619 836 - -
Prci10g0471 868 ProSiteProfiles CXC domain profile. 605 704 IPR026489 -
Prci10g0471 868 MobiDBLite consensus disorder prediction 346 433 - -
Prci10g0471 868 Pfam CXC domain 657 688 IPR041355 -
Prci10g0471 868 MobiDBLite consensus disorder prediction 842 868 - -
Prci10g0471 868 Pfam SET domain 730 833 IPR001214 GO:0005515
Prci10g0471 868 CDD SET_EZH 719 835 - -
Prci10g0471 868 Coils Coil 191 211 - -
Prci10g0471 868 SMART CXC_2 653 690 IPR033467 -
Prci10g0471 868 MobiDBLite consensus disorder prediction 842 861 - -
Prci10g0471 868 ProSiteProfiles SET domain profile. 719 834 IPR001214 GO:0005515
Prci10g0471 868 SUPERFAMILY SET domain 593 839 IPR046341 -
Prci10g0471 868 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 866 IPR045318 GO:0006338|GO:0042054
Prci10g0471 868 Gene3D SET domain 619 836 IPR046341 -
Prci10g0471 868 MobiDBLite consensus disorder prediction 379 423 - -
Prci10g0471 868 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 868 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0471 Prci-Chr10 3229968 3239012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0471 708 837 C2H2 Transcription Factor Family AT2G23740 27.211 6.96e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci10g0471 SET 4.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0471 - K11430 gmx:100799832 1362.05