Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0469 ATGTTTCAAGCGCACGTGCCTAGCTCAATAGATAGTAGAGAATTGGAACCAAGCCAAGGGGGATGGGGTTCGAGGAGGGGTGCGGTGAAGAAAGGGAATGTGGATTTGGTCATGGTAAATGAGGAGAAGGGCGCGTTTGGGTTGCCGAATTTGATGAAGGTGGCTGCAAAGGTTTTAGGAAATAAAGGGTTGGGATTGGCGTATAATGCAACCATGGCGAGTAGGTCGTCGGTGGTGGTGAAGGGAGCGAGAGCCATCAATCAGAGAGCAAGAGATTATTTTGATGCCAAGATGAGAGGTTTTGGGAGAATTAGACATGCCAACATCTTAACCATTTTGACTCATCATTTTCACAAAGAGAAGAAGCTCATCATCTCCAAATACATGCCTCAAGGCAGCTTGTTGTATGTTCTGCATGCATTGTAG 426 0.4624 MFQAHVPSSIDSRELEPSQGGWGSRRGAVKKGNVDLVMVNEEKGAFGLPNLMKVAAKVLGNKGLGLAYNATMASRSSVVVKGARAINQRARDYFDAKMRGFGRIRHANILTILTHHFHKEKKLIISKYMPQGSLLYVLHAL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0469 141 Pfam Protein tyrosine and serine/threonine kinase 65 139 IPR001245 GO:0004672|GO:0006468
Prci10g0469 141 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 139 IPR046959 -
Prci10g0469 141 Coils Coil 134 141 - -
Prci10g0469 141 Gene3D Phosphorylase Kinase; domain 1 28 128 - -
Prci10g0469 141 MobiDBLite consensus disorder prediction 1 27 - -
Prci10g0469 141 SUPERFAMILY Protein kinase-like (PK-like) 57 140 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0469 Prci-Chr10 3223247 3228294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0469 35 139 Receptor kinase-like Gene Family AT5G20690 60.000 2.69e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci10g0469 PK_Tyr_Ser-Thr 2.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0469 - - pcin:129323103 281.567