Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0460 ATGCTTGATCCTTCCTCTCCCACCATGAACGACCAGCTCTCCAAACCCACCTCAATCTTCGGTCTCCGCTTGTGGGTTGTTCTCGGGGTATGTGTCGGGGCCGCCATCGTGCTGCTTCTCTTCCTCATTTCCATCTGGCTCGCTTCCAAGCGCTCCAAGACTAACCCCGCGAGCAGACCGTCTATCCCGCCAGTCTCCAAAGAGATCCACGAGATTAGAATCGACCATCACCATGATTCCAAGCCGAAAGGGACCCGTATCCTAGCGGACCCGTCTCCCGAACTAGACCCGCTTTCCGGAATCGAGCGCCAGGCTCTGCTCCCTCCATCGGAAGAAGACAACCCGTCAGGGATCAACAGAATTCAATTTGAGATTGGGAAGAATCACAGAATTTCGTACCCTGAACGTGCTATGGCGCGGTCGTCTTCGGACGGAAGTGGGGAGGCGCGACTTGTCGATCAGGTGCCCACGGTGATTCCTGAAGTCTCGCATCTGGGTTGGGGTCACTGGTATACTCTGAGGGAGCTTGAGGATGCGACGAATGGGTTCGCCGACGAGAACGTCATTGGGGAAGGTGGCTACGGAATTGTTTACCATGGTATTCTGAAGGACAACACTCATGTTGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAGGAGTTCAAGGTCGAAGTGGAAGCCATAGGACGAGTGCGGCACAAGAATTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTAGAGCAGTGGCTGCACGGGGATGTTGGACCTTGCAGTCCTCTGAACTGGGAAATTCGAATGAACGTTATTCTGGGAACAGCAAAGGGTTTAGCTTATCTTCATGAGGGACTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTCTGATCGACAGGCAATGGAATTCGAAGGTCTCAGACTTTGGGCTTGCCAAACTCCTTGGCTCTGAGAGCAGCTACATTACAACACGTGTCATGGGCACATTTGGATATGTAGCTCCTGAATATGCAAGTACTGGAATGTTAAATGAACGAAGTGATGTGTATAGTTTTGGAATTCTTATAATGGAAATAATTACAGGCAGAAATCCAGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTGGTTGACTGGCTCAAGAAGATGGTTAGTAACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCAAGAGCACTCAAGCGAGCCCTTCTTGTGGCTTTACGTTGCACTGACCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTCATACATATGCTTGAAGCTGAGGATTCTCCTCACAAAGAGGATCGGAGGGCAAAAAGAGATGCAGGAAATTCAGCTAATGATGAGGATAGATTAAAAGAGGAGGCAACTGTGTCTGGTGATGATGGTAAAGTTTGA 1485 0.4875 MLDPSSPTMNDQLSKPTSIFGLRLWVVLGVCVGAAIVLLLFLISIWLASKRSKTNPASRPSIPPVSKEIHEIRIDHHHDSKPKGTRILADPSPELDPLSGIERQALLPPSEEDNPSGINRIQFEIGKNHRISYPERAMARSSSDGSGEARLVDQVPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYHGILKDNTHVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLNWEIRMNVILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDRQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEDRRAKRDAGNSANDEDRLKEEATVSGDDGKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0460 494 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Prci10g0460 494 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0460 494 MobiDBLite consensus disorder prediction 441 494 - -
Prci10g0460 494 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Prci10g0460 494 PANTHER OS01G0323000 PROTEIN 8 478 - -
Prci10g0460 494 MobiDBLite consensus disorder prediction 448 494 - -
Prci10g0460 494 Gene3D Transferase(Phosphotransferase) domain 1 259 473 - -
Prci10g0460 494 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0460 494 MobiDBLite consensus disorder prediction 72 94 - -
Prci10g0460 494 CDD STKc_IRAK 189 455 - -
Prci10g0460 494 Pfam Protein kinase domain 184 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0460 494 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Prci10g0460 494 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Prci10g0460 494 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Prci10g0460 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0460 Prci-Chr10 3129661 3132724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0460 26 456 Trihelix Transcription Factor Family AT5G38560 37.045 1.03e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci10g0460 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0460 - - qsa:O6P43_024625 815.068