Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0456 ATGGGGTGGGATCGAGGAGCCTCCCTTGGTGCCGGAGCCTTTGCTTCCATTCACTTGGCCATTCCCAGAGATACTTCTGCTCACTTTCCACCCCTTACAGCCGTCAAGTCCGCTGGTGTCCGAGCTTCTTCTTCTCTCCAGAACGAACAATACGTACTTAATCGGCTCGGACTCTGCCCCCAGATCATCAGGTGTTTCGGCCACGACTCTACCTTCGAGAACGGTTCCGAGTATTATAATTTGTTCCTGGAATACGCCGCCGGCGGTAGTCTAGCCGATCAGCTCAAGATTCACGGCGGAAGGTTGCCGGAATCCGATGTCCGCCGATACACCAGGTCCATCCTCCAGGGCCTCAGGCACATTCATGCTAACGGCTTCGTTCACTGTGATATAAAGCTTCCCAACATACTTCTCTTTGGCAGTGGAGAGGTCAAGATTGCAGACTTTGGACTCGCCAAGAAGTCAGGGGGAAAACAGGGCAGTGGAGAAACCAAGTATGAGCTCAGGGGAACTCCTGTGTGCATGTCCCCTGAATCAGTAAATGACAACGAGTACAAATCTCCGGTGGATATATGGGCCCTTGGGTGTGCGGTGGTAGAGATGGTCACCGGAAAACCCGCCTGGGATTTCAAGGATGGCTCCAATATTTTCTCGCTGTTGATGAGGATTGGGGCGGCAGATGAATTACCTGGGATTCCGAGTGATTTATCAGAAGAAGGGAAGGATTTTGTAAGAAAGTGTCTGGTGAAGGATGCTAGAAAGAGATGGACGGCGGAGAAGCTCTTGGAGCATCCCTTTGTGGCCAATGAAACCGTCTCATTGGATCGTGTGGAGGAGCCATCGACGTCCCCAAGAAGCCACTTCGATTTTCCACATTGGGTTTCCAAGGCAGCACCTTCGGCTCCAATTTCACCGGAAACGGATGCCTGTTGCGAATGGAAATTTGAATCGTGGCGCCTGTCCGATAACAGTTCGGCGGAGGATAGGCTCCGAAAATTGGTGACGAATCAGACGCGAAATTGGTCGGAATCTGACAGTTGGATTAATTTGGGACGACAGTTAGGAGAAACTTGCGGGTCGGATAACCAATGTGACGCGGGTCTTCGTTGCGAGACGTGCCCTGCAAATGGGAATACCCGACCCAGGTGTACCCGGATCCAGCCTGCGAGCCCCACTTCCAAGGTCAAAGGTCTGGCGTTCAACAGGTATTCATGGTTGACCACGCACAACTCGTACGCTCGCTCTGGCGCTACTTCGGCCACCGGATCCGCCATCCTGTCCCCAACCAACCAGGAAGACTCCGTCACCAGTCAGCTCAATGACGGCGTTCGAGGACTTATGTTAGACATGTACGACTTTGAAAACGACATCTGGCTGTGTCACTCCTTCGGTGGGCAATGCTACAACTTCACTTCATTTCAACCTGCCATCGACGTGCTGAGAGAGATACGTTCGTTTTTGGAGGCAAACCCAACAGAGATAGTGACCATCTTCATAGAAGACTACGTTACATCTTCCAATGGGCTCACCAAGGTGTTCAACGCTTCCGGCCTCTCCGACTACTTGTTTCCCCTGTCTCGGATGCCCAAGGATGGTGCTGACTGGCCCACCGTCGACGACATGGTTGAACAGAACCAGCGCCTCCTTGTTTTCACTTCCAAAGCATCCAAAGAAGCTTCCGAGGGCATCGCTTACCAGTGGAACTATGTCGTCGAAAACCAATACGGGGATGATGGAATGCAAGCTGGATCATGTCCGAAACGTGCAGAGTCGTCCGCGATGGACAACAAATCCAAGTCCCTGGTTCTGGTAAACTATTTTCCGACAGACCCTGTTGCAGCGCAAGCCTGCGCAAACAATTCAGCGCCAGTGCTTAGCATGATGAACACTTGCAATCAAGCATCGGGCAACCGGTGGCCGAATTTCATAGCTGTTGACTTTTATCAGAGGAGTGATGGGGGAGGATCCCCGGAAGCTGTTGATGAAGCCAATGGTCATCTCACTTGCGGTTGCGATAACATCGCCTACTGCAAGGCAAATGCTACATTTGGGACGTGCGATGTGCCAGTGATATCTCCGCCTCCACCGGCAGCCTTGGGTGATGGAGGATCAAACCAGCCTTCCCATTCCAACGGCAAAATTAAAGCCGGCCGTGTGCTGCAATCAGCTGCTCTTATTTTGGCGTTGGGAACTTTGTTGGCTTCCGTATGA 2211 0.5219 MGWDRGASLGAGAFASIHLAIPRDTSAHFPPLTAVKSAGVRASSSLQNEQYVLNRLGLCPQIIRCFGHDSTFENGSEYYNLFLEYAAGGSLADQLKIHGGRLPESDVRRYTRSILQGLRHIHANGFVHCDIKLPNILLFGSGEVKIADFGLAKKSGGKQGSGETKYELRGTPVCMSPESVNDNEYKSPVDIWALGCAVVEMVTGKPAWDFKDGSNIFSLLMRIGAADELPGIPSDLSEEGKDFVRKCLVKDARKRWTAEKLLEHPFVANETVSLDRVEEPSTSPRSHFDFPHWVSKAAPSAPISPETDACCEWKFESWRLSDNSSAEDRLRKLVTNQTRNWSESDSWINLGRQLGETCGSDNQCDAGLRCETCPANGNTRPRCTRIQPASPTSKVKGLAFNRYSWLTTHNSYARSGATSATGSAILSPTNQEDSVTSQLNDGVRGLMLDMYDFENDIWLCHSFGGQCYNFTSFQPAIDVLREIRSFLEANPTEIVTIFIEDYVTSSNGLTKVFNASGLSDYLFPLSRMPKDGADWPTVDDMVEQNQRLLVFTSKASKEASEGIAYQWNYVVENQYGDDGMQAGSCPKRAESSAMDNKSKSLVLVNYFPTDPVAAQACANNSAPVLSMMNTCNQASGNRWPNFIAVDFYQRSDGGGSPEAVDEANGHLTCGCDNIAYCKANATFGTCDVPVISPPPPAALGDGGSNQPSHSNGKIKAGRVLQSAALILALGTLLASV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0456 736 Gene3D Phosphatidylinositol (PI) phosphodiesterase 392 664 IPR017946 GO:0006629|GO:0008081
Prci10g0456 736 CDD STKc_MAPKKK 3 267 - -
Prci10g0456 736 PANTHER UNCHARACTERIZED 356 678 - -
Prci10g0456 736 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 400 505 - -
Prci10g0456 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Prci10g0456 736 SUPERFAMILY PLC-like phosphodiesterases 397 666 IPR017946 GO:0006629|GO:0008081
Prci10g0456 736 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0456 736 CDD PI-PLCc_At5g67130_like 389 664 - -
Prci10g0456 736 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Prci10g0456 736 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Prci10g0456 736 Gene3D Transferase(Phosphotransferase) domain 1 93 290 - -
Prci10g0456 736 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0456 736 SUPERFAMILY Protein kinase-like (PK-like) 4 303 IPR011009 -
Prci10g0456 736 Pfam Protein kinase domain 6 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0456 Prci-Chr10 3112244 3120953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0456 1 350 MAP Kinase Kinase Kinase AT4G36950 53.541 1.04e-118 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci10g0456 Pkinase 1.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0456 - - aprc:113869133 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0456 10 3112244 3120953 Prci5g0210 5 3021840 3023402 CCT
Prci10g0456 10 3112244 3120953 Prci10g0456 10 3112244 3120953 ECH